RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 ACTL7BQ9Y614 415 aa20.03■□□□□ 0.8
TRAF4-204ENST00000422344 ZNF407Q9C0G0 2248 aa20.02■□□□□ 0.8
TRAF4-204ENST00000422344 UPK1AO00322 258 aa20.02■□□□□ 0.8
TRAF4-204ENST00000422344 WDR1O75083 606 aa20.02■□□□□ 0.8
TRAF4-204ENST00000422344 ICOSLGO75144 302 aa20.02■□□□□ 0.8
TRAF4-204ENST00000422344 RPL3P39023 403 aaKnown RBP20.02■□□□□ 0.8
TRAF4-204ENST00000422344 CDK9P50750 372 aaKnown RBP20.02■□□□□ 0.8
TRAF4-204ENST00000422344 ZNF551Q7Z340 670 aaPredicted RBP20.02■□□□□ 0.8
TRAF4-204ENST00000422344 OR2L13Q8N349 312 aa20.02■□□□□ 0.8
TRAF4-204ENST00000422344 MARVELD2Q8N4S9 558 aa20.02■□□□□ 0.8
TRAF4-204ENST00000422344 OR6Y1Q8NGX8 325 aa20.02■□□□□ 0.8
TRAF4-204ENST00000422344 ASB5Q8WWX0 329 aa20.02■□□□□ 0.8
TRAF4-204ENST00000422344 CIDECQ96AQ7 238 aaPredicted RBP20.02■□□□□ 0.8
TRAF4-204ENST00000422344 MTERF3Q96E29 417 aa20.02■□□□□ 0.8
TRAF4-204ENST00000422344 ZBED6CLQ96FA7 236 aaPredicted RBP20.02■□□□□ 0.8
TRAF4-204ENST00000422344 TRIM8Q9BZR9 551 aa20.02■□□□□ 0.8
TRAF4-204ENST00000422344 GALNT9Q9HCQ5 603 aa20.02■□□□□ 0.8
TRAF4-204ENST00000422344 Q9N2J8 555 aa20.02■□□□□ 0.8
TRAF4-204ENST00000422344 GIMAP2Q9UG22 337 aa20.02■□□□□ 0.8
TRAF4-204ENST00000422344 NCOA6Q14686 2063 aaPredicted RBP20.01■□□□□ 0.79
TRAF4-204ENST00000422344 CACNA1CQ13936 2221 aa20.01■□□□□ 0.79
TRAF4-204ENST00000422344 TBX19O60806 448 aa20.01■□□□□ 0.79
TRAF4-204ENST00000422344 HPNP05981 417 aa20.01■□□□□ 0.79
TRAF4-204ENST00000422344 IFI6P09912 130 aa20.01■□□□□ 0.79
TRAF4-204ENST00000422344 ENDOUP21128 410 aaKnown RBP20.01■□□□□ 0.79
TRAF4-204ENST00000422344 GCKP35557 465 aa20.01■□□□□ 0.79
TRAF4-204ENST00000422344 PNLIPRP2P54317 469 aa20.01■□□□□ 0.79
TRAF4-204ENST00000422344 MANFP55145 182 aaKnown RBP20.01■□□□□ 0.79
TRAF4-204ENST00000422344 PMPCAQ10713 525 aa20.01■□□□□ 0.79
TRAF4-204ENST00000422344 FNDC7Q5VTL7 733 aa20.01■□□□□ 0.79
TRAF4-204ENST00000422344 B3GNT6Q6ZMB0 384 aa20.01■□□□□ 0.79
TRAF4-204ENST00000422344 RPRMLQ8N4K4 120 aa20.01■□□□□ 0.79
TRAF4-204ENST00000422344 FNDC5Q8NAU1 212 aa20.01■□□□□ 0.79
TRAF4-204ENST00000422344 EFHD2Q96C19 240 aaPredicted RBP20.01■□□□□ 0.79
TRAF4-204ENST00000422344 TUBGCP3Q96CW5 907 aa20.01■□□□□ 0.79
TRAF4-204ENST00000422344 DTNBP1Q96EV8 351 aa20.01■□□□□ 0.79
TRAF4-204ENST00000422344 UBQLN3Q9H347 655 aa20.01■□□□□ 0.79
TRAF4-204ENST00000422344 MRTO4Q9UKD2 239 aaKnown RBP20.01■□□□□ 0.79
TRAF4-204ENST00000422344 MAPRE3Q9UPY8 281 aa20.01■□□□□ 0.79
TRAF4-204ENST00000422344 NINQ8N4C6 2090 aa20.01■□□□□ 0.79
TRAF4-204ENST00000422344 C2orf72A6NCS6 295 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 SNPHO15079 494 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 TSPAN2O60636 221 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 LYPLA1O75608 230 aaPredicted RBP20■□□□□ 0.79
TRAF4-204ENST00000422344 HOXD4P09016 255 aaPredicted RBP20■□□□□ 0.79
TRAF4-204ENST00000422344 GABRA1P14867 456 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 GRK2P25098 689 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 PTPN6P29350 595 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 NUP107P57740 925 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 ABCE1P61221 599 aaKnown RBP20■□□□□ 0.79
TRAF4-204ENST00000422344 PSG6Q00889 435 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 PDE7AQ13946 482 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 CYP27C1Q4G0S4 372 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 ZNF385BQ569K4 471 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 C1orf185Q5T7R7 199 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 SZRD1Q7Z422 152 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 ZNF295-AS1Q8N0V1 137 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 OR4N2Q8NGD1 307 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 OR10Q1Q8NGQ4 319 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 PAIP2Q9BPZ3 127 aaKnown RBP20■□□□□ 0.79
TRAF4-204ENST00000422344 C1orf50Q9BV19 199 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 C3orf14Q9HBI5 128 aa20■□□□□ 0.79
TRAF4-204ENST00000422344 TTC36A6NLP5 189 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 SNUPNO95149 360 aaKnown RBP19.99■□□□□ 0.79
TRAF4-204ENST00000422344 PSMG1O95456 288 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 PRPS2P11908 318 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 CHRNB4P30926 498 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 PTGDSP41222 190 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 CDSNQ15517 529 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 DECR1Q16698 335 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 TNFAIP8L3Q5GJ75 292 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 C6orf136Q5SQH8 315 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 HHATQ5VTY9 493 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 CEP70Q8NHQ1 597 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 C3orf30Q96M34 536 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 TTYH2Q9BSA4 534 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 EQTNQ9NQ60 294 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 SERHLQ9NQF3 203 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 ACSS1Q9NUB1 689 aaPredicted RBP19.99■□□□□ 0.79
TRAF4-204ENST00000422344 CBLCQ9ULV8 474 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 RNF6Q9Y252 685 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 EIF3LQ9Y262 564 aaKnown RBP19.99■□□□□ 0.79
TRAF4-204ENST00000422344 WIF1Q9Y5W5 379 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 NCKAP5O14513 1909 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 DNAJC13O75165 2243 aa19.99■□□□□ 0.79
TRAF4-204ENST00000422344 MED13LQ71F56 2210 aa19.98■□□□□ 0.79
TRAF4-204ENST00000422344 C19orf84I3L1E1 186 aa19.98■□□□□ 0.79
TRAF4-204ENST00000422344 SCAMP2O15127 329 aaKnown RBP19.98■□□□□ 0.79
TRAF4-204ENST00000422344 ITM2AO43736 263 aa19.98■□□□□ 0.79
TRAF4-204ENST00000422344 CBR3O75828 277 aa19.98■□□□□ 0.79
TRAF4-204ENST00000422344 DHRS4L1P0CG22 281 aa19.98■□□□□ 0.79
TRAF4-204ENST00000422344 PRKAG1P54619 331 aa19.98■□□□□ 0.79
TRAF4-204ENST00000422344 PSMD4P55036 377 aaKnown RBP19.98■□□□□ 0.79
TRAF4-204ENST00000422344 MAD2L1Q13257 205 aaPredicted RBP19.98■□□□□ 0.79
TRAF4-204ENST00000422344 PDCD2Q16342 344 aaPredicted RBP19.98■□□□□ 0.79
TRAF4-204ENST00000422344 VPS26BQ4G0F5 336 aa19.98■□□□□ 0.79
TRAF4-204ENST00000422344 WIPI1Q5MNZ9 446 aaPredicted RBP19.98■□□□□ 0.79
TRAF4-204ENST00000422344 IL23RQ5VWK5 629 aa19.98■□□□□ 0.79
TRAF4-204ENST00000422344 WDR53Q7Z5U6 358 aaPredicted RBP19.98■□□□□ 0.79
TRAF4-204ENST00000422344 KIRREL3Q8IZU9 778 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 450.9 ms