RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 CD8B2A6NJW9 211 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 HSPB2A8KAH6 182 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 FAM47E-STBD1D6RA91 191 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 CBR3O75828 277 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 ACTL6AO96019 429 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 NUDT17P0C025 328 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 CYP4B1P13584 511 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 CPN1P15169 458 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 NCBP2P52298 156 aaKnown RBP eCLIP10.03□□□□□ -0.8
SSBP3-206ENST00000420121 VSNL1P62760 191 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 TOMM20Q15388 145 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 HSPB2Q16082 182 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 IMPG1Q17R60 797 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 ERCC6LQ2NKX8 1250 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 UGT3A2Q3SY77 523 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 FBXL19-AS1Q494R0 122 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 ZNF385BQ569K4 471 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 TMEM107Q6UX40 140 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 CDH24Q86UP0 819 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 TRABD2AQ86V40 505 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 PLCZ1Q86YW0 608 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 SLC44A2Q8IWA5 706 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-206ENST00000420121 PM20D2Q8IYS1 436 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 CLYBLQ8N0X4 340 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 OR2L13Q8N349 312 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 BANPQ8N9N5 519 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 C9orf106Q8NAJ2 232 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.03□□□□□ -0.89e-10■■■■■ 79.8
SSBP3-206ENST00000420121 EFHD2Q96C19 240 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-206ENST00000420121 TRIM44Q96DX7 344 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-206ENST00000420121 METTL2AQ96IZ6 378 aaKnown RBP10.03□□□□□ -0.8
SSBP3-206ENST00000420121 BBS4Q96RK4 519 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 RTN4RQ9BZR6 473 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 STMN4Q9H169 189 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-206ENST00000420121 RRAGDQ9NQL2 400 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-206ENST00000420121 GIMAP4Q9NUV9 329 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 TAS2R9Q9NYW1 312 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 FLRT3Q9NZU0 649 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 WBP11Q9Y2W2 641 aaKnown RBP10.03□□□□□ -0.8
SSBP3-206ENST00000420121 ITPR3Q14573 2671 aa10.03□□□□□ -0.8
SSBP3-206ENST00000420121 ABCA4P78363 2273 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 FAM221AA4D161 298 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 TMEM233B4DJY2 109 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 SYT5O00445 386 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 AZIN1O14977 448 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 FADS1O60427 444 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 ZIC3O60481 467 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 SLITRK5O94991 958 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 CHRNGP07510 517 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 IFI6P09912 130 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 SDC1P18827 310 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 BMP5P22003 454 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 GRK2P25098 689 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 SRD5A2P31213 254 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 ARRB2P32121 409 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 MAP3K8P41279 467 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 FRKP42685 505 aaPredicted RBP10.02□□□□□ -0.81
SSBP3-206ENST00000420121 LHX2P50458 406 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 ASCL1P50553 236 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 CLDN18P56856 261 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 B3GALT5-AS1P59052 145 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 PSPHP78330 225 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 ZNF155Q12901 538 aaPredicted RBP10.02□□□□□ -0.81
SSBP3-206ENST00000420121 GAB1Q13480 694 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 PDE7AQ13946 482 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 EFR3AQ14156 821 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 CFAP157Q5JU67 520 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 KANK2Q63ZY3 851 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 OR5M10Q6IEU7 315 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 ARSKQ6UWY0 536 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 PLXDC2Q6UX71 529 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 IKBIPQ70UQ0 350 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 LARP4Q71RC2 724 aaKnown RBP eCLIP10.02□□□□□ -0.81
SSBP3-206ENST00000420121 ZNF551Q7Z340 670 aaPredicted RBP10.02□□□□□ -0.81
SSBP3-206ENST00000420121 TRIM42Q8IWZ5 723 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 FADS6Q8N9I5 356 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 ZPLD1Q8TCW7 415 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 NRGNQ92686 78 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 HOXB13Q92826 284 aaPredicted RBP10.02□□□□□ -0.81
SSBP3-206ENST00000420121 TMCO6Q96DC7 493 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 ELP4Q96EB1 424 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 ZNF764Q96H86 408 aaPredicted RBP10.02□□□□□ -0.81
SSBP3-206ENST00000420121 APOPT1Q96IL0 206 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 UCN2Q96RP3 112 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 TUBA1CQ9BQE3 449 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 ZNF559Q9BR84 538 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 LMF2Q9BU23 707 aaKnown RBP10.02□□□□□ -0.81
SSBP3-206ENST00000420121 MECRQ9BV79 373 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 CALHM2Q9HA72 323 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 LRTM1Q9HBL6 345 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 MIEF1Q9NQG6 463 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 JKAMPQ9P055 326 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 SLC17A7Q9P2U7 560 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 ZNF629Q9UEG4 869 aaPredicted RBP10.02□□□□□ -0.81
SSBP3-206ENST00000420121 LGALS13Q9UHV8 139 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 MRPS18CQ9Y3D5 142 aaKnown RBP10.02□□□□□ -0.81
SSBP3-206ENST00000420121 DNAJC15Q9Y5T4 150 aa10.02□□□□□ -0.81
SSBP3-206ENST00000420121 ZNF469Q96JG9 3925 aaPredicted RBP10.02□□□□□ -0.81
SSBP3-206ENST00000420121 PRRC2AP48634 2157 aaKnown RBP10.01□□□□□ -0.81
SSBP3-206ENST00000420121 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms