RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 UCK2Q9BZX2 261 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 PRDM14Q9GZV8 571 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 SSU72Q9NP77 194 aaKnown RBP15.02■□□□□ -0
LINC00404-201ENST00000418660 SERHLQ9NQF3 203 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 Q9UFV3 132 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 BAIAP2L1Q9UHR4 511 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 ZDHHC2Q9UIJ5 367 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 SLC6A5Q9Y345 797 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 CELSR2Q9HCU4 2923 aa15.02□□□□□ -0.01
LINC00404-201ENST00000418660 DNAJC13O75165 2243 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 CACNA1DQ01668 2161 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 NKX2-6A6NCS4 301 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 TTC36A6NLP5 189 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 TMEM114B3SHH9 223 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 ACTL6AO96019 429 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 BCKDHAP12694 445 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 BMP7P18075 431 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 MAPK1P28482 360 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 ADH7P40394 386 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 FRKP42685 505 aaPredicted RBP15.01□□□□□ -0.01
LINC00404-201ENST00000418660 SERPINB4P48594 390 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 HSPB3Q12988 150 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 SF3B4Q15427 424 aaKnown RBP eCLIP15.01□□□□□ -0.01
LINC00404-201ENST00000418660 ZNHIT3Q15649 155 aaPredicted RBP15.01□□□□□ -0.01
LINC00404-201ENST00000418660 ZNF385BQ569K4 471 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 XKR7Q5GH72 579 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 YRDCQ86U90 279 aaKnown RBP15.01□□□□□ -0.01
LINC00404-201ENST00000418660 EXOC3L1Q86VI1 746 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 NUDCD3Q8IVD9 361 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 FAM83FQ8NEG4 500 aaPredicted RBP15.01□□□□□ -0.01
LINC00404-201ENST00000418660 CLHC1Q8NHS4 586 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 ZFP28Q8NHY6 868 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 CIDECQ96AQ7 238 aaPredicted RBP15.01□□□□□ -0.01
LINC00404-201ENST00000418660 EFHD2Q96C19 240 aaPredicted RBP15.01□□□□□ -0.01
LINC00404-201ENST00000418660 DTNBP1Q96EV8 351 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 ZBED6CLQ96FA7 236 aaPredicted RBP15.01□□□□□ -0.01
LINC00404-201ENST00000418660 TREX2Q9BQ50 279 aaPredicted RBP15.01□□□□□ -0.01
LINC00404-201ENST00000418660 LMF2Q9BU23 707 aaKnown RBP15.01□□□□□ -0.01
LINC00404-201ENST00000418660 UGT2B28Q9BY64 529 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 TRIM8Q9BZR9 551 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 Q9N2J8 555 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 SH3BP4Q9P0V3 963 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 WIF1Q9Y5W5 379 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 TEX15Q9BXT5 2789 aa15.01□□□□□ -0.01
LINC00404-201ENST00000418660 PHF3Q92576 2039 aaKnown RBP15□□□□□ -0.01
LINC00404-201ENST00000418660 ITPR2Q14571 2701 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 PEX11AO75192 247 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 EPPINO95925 133 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 PRPS2P11908 318 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 CYP4B1P13584 511 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 DDX5P17844 614 aaKnown RBP15□□□□□ -0.01
LINC00404-201ENST00000418660 GPC1P35052 558 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 GCKP35557 465 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 MANFP55145 182 aaKnown RBP15□□□□□ -0.01
LINC00404-201ENST00000418660 TFF3Q07654 80 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 GAB1Q13480 694 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 DECR1Q16698 335 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 ACSF3Q4G176 576 aaPredicted RBP15□□□□□ -0.01
LINC00404-201ENST00000418660 ATP6AP1LQ52LC2 224 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 LRIG3Q6UXM1 1119 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 MEX3BQ6ZN04 569 aaKnown RBP15□□□□□ -0.01
LINC00404-201ENST00000418660 R3HCC1LQ7Z5L2 792 aaKnown RBP15□□□□□ -0.01
LINC00404-201ENST00000418660 ZNF295-AS1Q8N0V1 137 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 PPP1R14CQ8TAE6 165 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 ABTB1Q969K4 478 aaPredicted RBP15□□□□□ -0.01
LINC00404-201ENST00000418660 WDYHV1Q96HA8 205 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 OR2B2Q9GZK3 357 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 C3orf14Q9HBI5 128 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 ACSS1Q9NUB1 689 aaPredicted RBP15□□□□□ -0.01
LINC00404-201ENST00000418660 MRTO4Q9UKD2 239 aaKnown RBP15□□□□□ -0.01
LINC00404-201ENST00000418660 CBLCQ9ULV8 474 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 CAMK2AQ9UQM7 478 aa15□□□□□ -0.01
LINC00404-201ENST00000418660 CRYBG3Q68DQ2 2970 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 HSPB2A8KAH6 182 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 TM9SF1O15321 606 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 BIRC5O15392 142 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 HPCAL1P37235 193 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 RPL3P39023 403 aaKnown RBP14.99□□□□□ -0.01
LINC00404-201ENST00000418660 GAS1P54826 345 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 HSPB2Q16082 182 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 TNFAIP8L3Q5GJ75 292 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 C6orf136Q5SQH8 315 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 CEP85LQ5SZL2 805 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 SEM1Q6ZVN7 128 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 WDR53Q7Z5U6 358 aaPredicted RBP14.99□□□□□ -0.01
LINC00404-201ENST00000418660 CROCCP2Q86T23 111 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 LACC1Q8IV20 430 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 OR14L1PQ8NHC6 308 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 CEP70Q8NHQ1 597 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 PKNOX2Q96KN3 472 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 C3orf30Q96M34 536 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 NPDC1Q9NQX5 325 aaPredicted RBP14.99□□□□□ -0.01
LINC00404-201ENST00000418660 NTMQ9P121 344 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 GIMAP2Q9UG22 337 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 ATP6V1HQ9UI12 483 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 ABCG2Q9UNQ0 655 aa14.99□□□□□ -0.01
LINC00404-201ENST00000418660 MRPS18CQ9Y3D5 142 aaKnown RBP14.99□□□□□ -0.01
LINC00404-201ENST00000418660 WDR91A4D1P6 747 aa14.98□□□□□ -0.01
LINC00404-201ENST00000418660 FADS1O60427 444 aa14.98□□□□□ -0.01
LINC00404-201ENST00000418660 SKAP2O75563 359 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms