RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 FAM173AQ9BQD7 235 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 INPP5KQ9BT40 448 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 PROK2Q9HC23 129 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 GPATCH2Q9NW75 528 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 TUBA8Q9NY65 449 aaPredicted RBP11.46□□□□□ -0.57
SKA1-203ENST00000417656 CNIH4Q9P003 139 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 BTNL2Q9UIR0 455 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 CBLCQ9ULV8 474 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 PCDHGB4Q9UN71 923 aa11.46□□□□□ -0.57
SKA1-203ENST00000417656 FAM234BA2RU67 622 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 PRAMEF25A6NGN4 478 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 OR6C70A6NIJ9 312 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 TTC36A6NLP5 189 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 FAM166BA8MTA8 275 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 NR5A2O00482 541 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 NKX2-2O95096 273 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 ALOX5P09917 674 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 CYP4B1P13584 511 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 CNR1P21554 472 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 MAP3K8P41279 467 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 CDKN2CP42773 168 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 ATP4BP51164 291 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 POLR2JP52435 117 aaKnown RBP11.45□□□□□ -0.58
SKA1-203ENST00000417656 GYS2P54840 703 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 KCNJ2P63252 427 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 RPP38P78345 283 aaKnown RBP11.45□□□□□ -0.58
SKA1-203ENST00000417656 PLGLB1Q02325 96 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 SQLEQ14534 574 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 VPS26BQ4G0F5 336 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 CYP27C1Q4G0S4 372 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 EXOSC6Q5RKV6 272 aaKnown RBP11.45□□□□□ -0.58
SKA1-203ENST00000417656 CDC73Q6P1J9 531 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 GALNT10Q86SR1 603 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 ATCAYQ86WG3 371 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 COX18Q8N8Q8 333 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 POGLUT1Q8NBL1 392 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 VPS37AQ8NEZ2 397 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 DNAJB8Q8NHS0 232 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 SLC35G5Q96KT7 338 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 ZNF317Q96PQ6 595 aaPredicted RBP11.45□□□□□ -0.58
SKA1-203ENST00000417656 PANX1Q96RD7 426 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 ADOQ96SZ5 270 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 DOHHQ9BU89 302 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 OSBPL11Q9BXB4 747 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 TTTY12Q9BZ98 90 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 SERHL2Q9H4I8 314 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 ZNF385DQ9H6B1 395 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 METTL7AQ9H8H3 244 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 FLRT3Q9NZU0 649 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 VPS4AQ9UN37 437 aa11.45□□□□□ -0.58
SKA1-203ENST00000417656 NUP214P35658 2090 aaPredicted RBP11.44□□□□□ -0.58
SKA1-203ENST00000417656 LRRC3CA6NJW4 275 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 NPIPA5E9PKD4 350 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 TFECO14948 347 aaPredicted RBP11.44□□□□□ -0.58
SKA1-203ENST00000417656 ICOSLGO75144 302 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 WISP2O76076 250 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 IGKV1D-16P01601 117 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 IL6P05231 212 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 EDN3P14138 238 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 NCF2P19878 526 aaPredicted RBP11.44□□□□□ -0.58
SKA1-203ENST00000417656 GNLYP22749 145 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 CASP3P42574 277 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 MRPS22P82650 360 aaKnown RBP11.44□□□□□ -0.58
SKA1-203ENST00000417656 FOXO1Q12778 655 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 MRPL49Q13405 166 aaKnown RBP11.44□□□□□ -0.58
SKA1-203ENST00000417656 RCAN2Q14206 197 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 DECR1Q16698 335 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 TBCELQ5QJ74 424 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 ZCCHC12Q6PEW1 402 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 NUP54Q7Z3B4 507 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 FUNDC1Q8IVP5 155 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 SIAH3Q8IW03 269 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 GALNT11Q8NCW6 608 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 OR5D16Q8NGK9 328 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 CDS1Q92903 461 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 VPS33AQ96AX1 596 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 ZNF597Q96LX8 424 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 JSRP1Q96MG2 331 aaPredicted RBP11.44□□□□□ -0.58
SKA1-203ENST00000417656 SECISBP2Q96T21 854 aaKnown RBP11.44□□□□□ -0.58
SKA1-203ENST00000417656 SLC35A5Q9BS91 424 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 ACTRT3Q9BYD9 372 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 GALNT9Q9HCQ5 603 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 SERHLQ9NQF3 203 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 KLRF1Q9NZS2 232 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 CCDC167Q9P0B6 97 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 NPIPA1Q9UND3 350 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 FAF1Q9UNN5 650 aaPredicted RBP11.44□□□□□ -0.58
SKA1-203ENST00000417656 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.44□□□□□ -0.58
SKA1-203ENST00000417656 NCKAP5O14513 1909 aa11.44□□□□□ -0.58
SKA1-203ENST00000417656 ACOT7O00154 380 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 RFXANKO14593 260 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 SCO2O43819 266 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 HS6ST1O60243 411 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 GLSO94925 669 aaPredicted RBP11.43□□□□□ -0.58
SKA1-203ENST00000417656 KCNH1O95259 989 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 IL33O95760 270 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 C1QCP02747 245 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 GSNP06396 782 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 KRT16P08779 473 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 CD1EP15812 388 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms