RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 PAQR5Q9NXK6 330 aaPredicted RBP13.58□□□□□ -0.23
HDAC9-208ENST00000417496 ADAM29Q9UKF5 820 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 CSNK1G3Q9Y6M4 447 aa13.58□□□□□ -0.23
HDAC9-208ENST00000417496 PTPRSQ13332 1948 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 NUP210Q8TEM1 1887 aaPredicted RBP13.58□□□□□ -0.24
HDAC9-208ENST00000417496 SNRNP200O75643 2136 aaKnown RBP13.58□□□□□ -0.24
HDAC9-208ENST00000417496 CCDC182A6NF36 153 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 CENPXA8MT69 81 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 B4DXG7 233 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 POLR1CO15160 346 aaPredicted RBP13.58□□□□□ -0.24
HDAC9-208ENST00000417496 PIP5K1CO60331 668 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 THY1P04216 161 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 ATP5A1P25705 553 aaKnown RBP13.58□□□□□ -0.24
HDAC9-208ENST00000417496 HSD17B2P37059 387 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 RAB28P51157 221 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 CD83Q01151 205 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 TGM3Q08188 693 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 NDUFA9Q16795 377 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 ABHD17CQ6PCB6 329 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 XKRXQ6PP77 449 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 ART5Q96L15 291 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 SPATA5L1Q9BVQ7 753 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 SLC22A4Q9H015 551 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 WDR26Q9H7D7 661 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 NPAP1Q9NZP6 1156 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 GRIP1Q9Y3R0 1128 aa13.58□□□□□ -0.24
HDAC9-208ENST00000417496 KIF26AQ9ULI4 1882 aaPredicted RBP13.57□□□□□ -0.24
HDAC9-208ENST00000417496 EFCAB14O75071 495 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 EIF2S1P05198 315 aaKnown RBP13.57□□□□□ -0.24
HDAC9-208ENST00000417496 FUT1P19526 365 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 CDH11P55287 796 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 TPBGQ13641 420 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 C1QTNF12Q5T7M4 302 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 QSOX2Q6ZRP7 698 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 DTX3Q8N9I9 347 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 NUP43Q8NFH3 380 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 OR52E1Q8NGJ3 308 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 TMEM255BQ8WV15 326 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 SMG7Q92540 1137 aaKnown RBP13.57□□□□□ -0.24
HDAC9-208ENST00000417496 UFD1Q92890 307 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 ARHGAP9Q9BRR9 750 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 OR2B2Q9GZK3 357 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 CLCA2Q9UQC9 943 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 SPEGQ15772 3267 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 A0A0G2JPF8 293 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 ZC3H12DA2A288 527 aaKnown RBP13.57□□□□□ -0.24
HDAC9-208ENST00000417496 CD8B2A6NJW9 211 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 HNRNPCL2B2RXH8 293 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 HNRNPCL3B7ZW38 293 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 C1QTNF3-AMACRE9PGA6 284 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 HNRNPCL4P0DMR1 293 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 CD8BP10966 210 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 MYOGP15173 224 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 SLC1A3P43003 542 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 OMPP47874 163 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 PDX1P52945 283 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 ASAH1Q13510 395 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 IRF4Q15306 451 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 FAM214AQ32MH5 1076 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 ZNF628Q5EBL2 1059 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 SLC35F1Q5T1Q4 408 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 NRMQ8IXM6 262 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 KCT2Q8NC54 265 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 SLC16A11Q8NCK7 471 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 DIO2Q92813 273 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 NT5DC2Q9H857 520 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 SLC13A4Q9UKG4 626 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 SNX7Q9UNH6 387 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 LIPT1Q9Y234 373 aa13.57□□□□□ -0.24
HDAC9-208ENST00000417496 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.57□□□□□ -0.24
HDAC9-208ENST00000417496 A0A1W2PP55 124 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 TMEM129A0AVI4 362 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 CACNB4O00305 520 aaPredicted RBP13.56□□□□□ -0.24
HDAC9-208ENST00000417496 TRANK1O15050 2925 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 CCNYL3P0C7X3 344 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 GSTM3P21266 225 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 S100A1P23297 94 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 MYL9P24844 172 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 UBE3AQ05086 875 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 TSPAN31Q12999 210 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 MINDY4Q4G0A6 757 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 AGBL4Q5VU57 503 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 CNIH2Q6PI25 160 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 OR4N5Q8IXE1 308 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 GALNT12Q8IXK2 581 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 FAM181AQ8N9Y4 354 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 ZNF485Q8NCK3 441 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 NACC2Q96BF6 587 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 ELP4Q96EB1 424 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 SENP5Q96HI0 755 aaPredicted RBP13.56□□□□□ -0.24
HDAC9-208ENST00000417496 NECTIN4Q96NY8 510 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 SLC38A2Q96QD8 506 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 TMEM246Q9BRR3 403 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 PINK1Q9BXM7 581 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 HDAC8Q9BY41 377 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 FGF20Q9NP95 211 aaPredicted RBP13.56□□□□□ -0.24
HDAC9-208ENST00000417496 B3GAT2Q9NPZ5 323 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 APOBEC3BQ9UH17 382 aaKnown RBP13.56□□□□□ -0.24
HDAC9-208ENST00000417496 CES1P1Q9UKY3 287 aa13.56□□□□□ -0.24
HDAC9-208ENST00000417496 ENTPD4Q9Y227 616 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms