RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 PPP3CBP16298 524 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 PCSK2P16519 638 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 HK1P19367 917 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 EMDP50402 254 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 NR1H2P55055 460 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 RPS3AP61247 264 aaKnown RBP9.04□□□□□ -0.96
MDC1-202ENST00000416571 PSPHP78330 225 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 NAB1Q13506 487 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 VEZF1Q14119 521 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 LTB4RQ15722 352 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 SGCBQ16585 318 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 ERCC6LQ2NKX8 1250 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 HMBOX1Q6NT76 420 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 FAM180BQ6P0A1 224 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 ZNF704Q6ZNC4 412 aaPredicted RBP9.04□□□□□ -0.96
MDC1-202ENST00000416571 COMMD6Q7Z4G1 85 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 CCDC25Q86WR0 208 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 CREG2Q8IUH2 290 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 METTL4Q8N3J2 472 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 ZNF610Q8N9Z0 462 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 OR52B6Q8NGF0 335 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 FNDC9Q8TBE3 224 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 GFM2Q969S9 779 aaKnown RBP9.04□□□□□ -0.96
MDC1-202ENST00000416571 PRRG4Q9BZD6 226 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 PTGES2Q9H7Z7 377 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 SDHAF3Q9NRP4 125 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 NMRK1Q9NWW6 199 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 SENP1Q9P0U3 644 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 WHRNQ9P202 907 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 UTS2RQ9UKP6 389 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 CES1P1Q9UKY3 287 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 ZNF175Q9Y473 711 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 OR10H1Q9Y4A9 318 aa9.04□□□□□ -0.96
MDC1-202ENST00000416571 ZANQ9Y493 2812 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 A0A096LPK6 155 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 LINC01387J3KSC0 135 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 OR7A17O14581 309 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 TSPAN2O60636 221 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 KLHL2O95198 593 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 PLGP00747 810 aaPredicted RBP9.03□□□□□ -0.96
MDC1-202ENST00000416571 CGAP01215 116 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 C2P06681 752 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 PAX1P15863 534 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 TYK2P29597 1187 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 PNLIPRP2P54317 469 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 CORO7P57737 925 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 DUSP2Q05923 314 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 TNK1Q13470 666 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 PON3Q15166 354 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 UAP1Q16222 522 aaPredicted RBP9.03□□□□□ -0.96
MDC1-202ENST00000416571 MROH9Q5TGP6 573 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 PODNL1Q6PEZ8 512 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 FAM214BQ7L5A3 538 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 MILR1Q7Z6M3 343 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 PTGR2Q8N8N7 351 aaPredicted RBP9.03□□□□□ -0.96
MDC1-202ENST00000416571 ZNF675Q8TD23 568 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 FBF1Q8TES7 1133 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 SELENOMQ8WWX9 145 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 EFHD2Q96C19 240 aaPredicted RBP9.03□□□□□ -0.96
MDC1-202ENST00000416571 MRRFQ96E11 262 aaKnown RBP9.03□□□□□ -0.96
MDC1-202ENST00000416571 PHF21BQ96EK2 531 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 CNRIP1Q96F85 164 aaPredicted RBP9.03□□□□□ -0.96
MDC1-202ENST00000416571 MARK4Q96L34 752 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 BTBD9Q96Q07 612 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 ERP44Q9BS26 406 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 NTMT1Q9BV86 223 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 DSN1Q9H410 356 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 RNF122Q9H9V4 155 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 GIMAP4Q9NUV9 329 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 ZNF701Q9NV72 531 aaPredicted RBP9.03□□□□□ -0.96
MDC1-202ENST00000416571 EMC9Q9Y3B6 208 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 SAR1BQ9Y6B6 198 aa9.03□□□□□ -0.96
MDC1-202ENST00000416571 RNF223E7ERA6 249 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 H0YC42 278 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 HS3ST1O14792 307 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 SMIM24O75264 130 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 CT45A8P0DMV1 189 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 CT45A9P0DMV2 189 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 LOXP28300 417 aaPredicted RBP9.02□□□□□ -0.97
MDC1-202ENST00000416571 EVI2BP34910 448 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 CLK3P49761 638 aaKnown RBP9.02□□□□□ -0.97
MDC1-202ENST00000416571 SUCLG1P53597 346 aaKnown RBP9.02□□□□□ -0.97
MDC1-202ENST00000416571 TPD52P55327 224 aaPredicted RBP9.02□□□□□ -0.97
MDC1-202ENST00000416571 CTBP2P56545 445 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 B3GALT5-AS1P59052 145 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 RPS4XP62701 263 aaKnown RBP9.02□□□□□ -0.97
MDC1-202ENST00000416571 TRA2BP62995 288 aaKnown RBP9.02□□□□□ -0.97
MDC1-202ENST00000416571 MRPS25P82663 173 aaKnown RBP9.02□□□□□ -0.97
MDC1-202ENST00000416571 TRAF3Q13114 568 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 STX5Q13190 355 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 GANABQ14697 944 aaKnown RBP9.02□□□□□ -0.97
MDC1-202ENST00000416571 ETFDHQ16134 617 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 CLEC12BQ2HXU8 276 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 GGTA1PQ4G0N0 100 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 CT45A2Q5DJT8 189 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 ZNF628Q5EBL2 1059 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 SH2D4BQ5SQS7 431 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 HEPHL1Q6MZM0 1159 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 SH2D5Q6ZV89 423 aa9.02□□□□□ -0.97
MDC1-202ENST00000416571 WFDC8Q8IUA0 241 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms