RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 BCDIN3DQ7Z5W3 292 aaKnown RBP14.35□□□□□ -0.11
LRCH3-202ENST00000414675 KIF18BQ86Y91 864 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 CACTIN-AS1Q8N1I8 211 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 OR9A4Q8NGU2 314 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 CCDC3Q9BQI4 270 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 ITPAQ9BY32 194 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 FOXQ1Q9C009 403 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 PALMDQ9NP74 551 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 PRDM9Q9NQV7 894 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 CLN6Q9NWW5 311 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 DNAJC27Q9NZQ0 273 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 A0A1W2PR77 199 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 SLC9B1P1A6NJY1 282 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 M0R3G1 203 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 CYP7B1O75881 506 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 THY1P04216 161 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 ATP1B1P05026 303 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 HNRNPCP07910 306 aaKnown RBP eCLIP14.35□□□□□ -0.113e-6■■□□□ 13.9
LRCH3-202ENST00000414675 ZNF12P17014 697 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 NT5EP21589 574 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 PRKAR1BP31321 381 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 SLC15A1P46059 708 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 EXOSC7Q15024 291 aaKnown RBP14.35□□□□□ -0.11
LRCH3-202ENST00000414675 ARHGAP11BQ3KRB8 267 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 PUS10Q3MIT2 529 aaKnown RBP14.35□□□□□ -0.11
LRCH3-202ENST00000414675 EXOSC6Q5RKV6 272 aaKnown RBP14.35□□□□□ -0.11
LRCH3-202ENST00000414675 MANEAQ5SRI9 462 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.35□□□□□ -0.11
LRCH3-202ENST00000414675 ARMC6Q6NXE6 501 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 C1orf94Q6P1W5 598 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 DGAT2L6Q6ZPD8 337 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 TMCO5AQ8N6Q1 288 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 ZNF655Q8N720 491 aaPredicted RBP14.35□□□□□ -0.11
LRCH3-202ENST00000414675 ANKRD9Q96BM1 317 aaPredicted RBP14.35□□□□□ -0.11
LRCH3-202ENST00000414675 PPP1R14BQ96C90 147 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 SDF2Q99470 211 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 BCL7BQ9BQE9 202 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 SLC25A19Q9HC21 320 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 FBXO34Q9NWN3 711 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 ZNF443Q9Y2A4 671 aaPredicted RBP14.35□□□□□ -0.11
LRCH3-202ENST00000414675 WDR45Q9Y484 360 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 SPAG17Q6Q759 2223 aa14.35□□□□□ -0.11
LRCH3-202ENST00000414675 A0A1W2PPC1 479 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 SH3D21A4FU49 640 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 SLC22A1O15245 554 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 MPZL2O60487 215 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 ZNF217O75362 1048 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 CDH3P22223 829 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 NUDT1P36639 197 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 SNRPGP62308 76 aaKnown RBP14.34□□□□□ -0.11
LRCH3-202ENST00000414675 UBXN2BQ14CS0 331 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 TIGD6Q17RP2 521 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 PRICKLE4Q2TBC4 344 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 CD300LDQ6UXZ3 194 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 ZNF836Q6ZNA1 936 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 PRICKLE2Q7Z3G6 844 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 ZNF554Q86TJ5 538 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 SLCO6A1Q86UG4 719 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 ARL14Q8N4G2 192 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 C19orf47Q8N9M1 422 aaKnown RBP14.34□□□□□ -0.11
LRCH3-202ENST00000414675 ZNF675Q8TD23 568 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 PIK3R3Q92569 461 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 FCGR1BQ92637 280 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 SLC38A4Q969I6 547 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 COX4I2Q96KJ9 171 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 RBCK1Q9BYM8 510 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 PLA2G12AQ9BZM1 189 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 ARMC7Q9H6L4 198 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 NECTIN3Q9NQS3 549 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 MAT2BQ9NZL9 334 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 SLC13A4Q9UKG4 626 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 CBFA2T3O75081 653 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 UBXN7O94888 489 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 CSF2P04141 144 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 GRK5P34947 590 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 RNF144AP50876 292 aaPredicted RBP14.34□□□□□ -0.11
LRCH3-202ENST00000414675 RAB15P59190 212 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 ALDH6A1Q02252 535 aaKnown RBP14.34□□□□□ -0.11
LRCH3-202ENST00000414675 SMAD2Q15796 467 aaKnown RBP14.34□□□□□ -0.11
LRCH3-202ENST00000414675 MAPK14Q16539 360 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 ACSM5Q6NUN0 579 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 RBM12BQ8IXT5 1001 aaKnown RBP14.34□□□□□ -0.11
LRCH3-202ENST00000414675 TCEANCQ8N8B7 351 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 PIGUQ9H490 435 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 CORINQ9Y5Q5 1042 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 PMF1-BGLAPU3KQ54 211 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 SPACA6W5XKT8 324 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 LAMA1P25391 3075 aa14.34□□□□□ -0.11
LRCH3-202ENST00000414675 NPIPA5A0A0B4J1W7 369 aa14.33□□□□□ -0.12
LRCH3-202ENST00000414675 METTL12A8MUP2 240 aa14.33□□□□□ -0.12
LRCH3-202ENST00000414675 NPIPA7E9PJI5 369 aa14.33□□□□□ -0.12
LRCH3-202ENST00000414675 PRKYO43930 277 aa14.33□□□□□ -0.12
LRCH3-202ENST00000414675 PLOD3O60568 738 aa14.33□□□□□ -0.12
LRCH3-202ENST00000414675 OCM2P0CE71 109 aa14.33□□□□□ -0.12
LRCH3-202ENST00000414675 OCMP0CE72 109 aaPredicted RBP14.33□□□□□ -0.12
LRCH3-202ENST00000414675 NPIPA8P0DM63 369 aa14.33□□□□□ -0.12
LRCH3-202ENST00000414675 CD27P26842 260 aa14.33□□□□□ -0.12
LRCH3-202ENST00000414675 OPRL1P41146 370 aa14.33□□□□□ -0.12
LRCH3-202ENST00000414675 RGS8P57771 180 aaPredicted RBP14.33□□□□□ -0.12
LRCH3-202ENST00000414675 ATP1A4Q13733 1029 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms