RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 GOLT1BQ9Y3E0 138 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM184BQ9Y519 407 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-203ENST00000414174 CDY2AQ9Y6F7 541 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 GAPVD1Q14C86 1478 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 MROH7-TTC4A0A0A0MT08 1334 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 UMODL1Q5DID0 1318 aa3.39□□□□□ -1.87
SF3B1-203ENST00000414174 DHX57Q6P158 1386 aaKnown RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 PRAG1Q86YV5 1406 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 YEATS2Q9ULM3 1422 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 WDR97A6NE52 1622 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 A0A087WWL8 130 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 TEX13DA0A0J9YY54 714 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 A0A1B0GV72 72 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 A0A1W2PRX2 142 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 UBA6A0AVT1 1052 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 MAGEA13PA6NCF6 341 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 NEMP2A6NFY4 417 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 AGAP5A6NIR3 686 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 DUXAA6NLW8 204 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 FAM90A27PA6NNH2 459 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 SLC38A8A6NNN8 435 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 PP2D1A8MPX8 630 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM233B4DJY2 109 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 TEX46H3BTG2 121 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 J3KTA2 159 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 P2RY10O00398 339 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 KPNA3O00505 521 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 DLGAP1O14490 977 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 GOSR2O14653 212 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 PRMT5O14744 637 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 RAB29O14966 203 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 B4GALT5O43286 388 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 OR10H3O60404 316 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 RAMP3O60896 148 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 HUS1O60921 280 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 ADAP1O75689 374 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 RAD51DO75771 328 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 OR4F21O95013 312 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 VAPBO95292 243 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 CTDNEP1O95476 244 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 LY86O95711 162 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 ESRRBO95718 433 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 VIPP01282 170 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 IFNA5P01569 189 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 ERBB2P04626 1255 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 SERPINE2P07093 398 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 SCGB1A1P11684 91 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 IL2RBP14784 551 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 GOT1P17174 413 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 OGNP20774 298 aaKnown RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 S1PR1P21453 382 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 FPR1P21462 350 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 ZP3P21754 424 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 PAICSP22234 425 aaKnown RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 TIMP3P35625 211 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 UGT2B10P36537 528 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 IDH2P48735 452 aaKnown RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 ACOT2P49753 483 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 HLCSP50747 726 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 TPMTP51580 245 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 UCNP55089 124 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 MLLT10P55197 1068 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 CDH13P55290 713 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 WNT3AP56704 352 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 NANOS3P60323 173 aaKnown RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 RAP1BP61224 184 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 NUTF2P61970 127 aaKnown RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 E2F1Q01094 437 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 FGL1Q08830 312 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 NFATC3Q12968 1075 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 PCOLCEQ15113 449 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 GPR19Q15760 415 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 TATDN3Q17R31 274 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 KIF19Q2TAC6 998 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 QRICH1Q2TAL8 776 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 ADPRMQ3LIE5 342 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 ARMCX4Q5H9R4 360 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 MANEALQ5VSG8 457 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 DCAF12L1Q5VU92 463 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 SYPL2Q5VXT5 272 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 PMS2CLQ68D20 193 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 TXNDC8Q6A555 127 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 RHBDD2Q6NTF9 364 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF544Q6NX49 715 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 FAHD2BQ6P2I3 314 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 TRMT10BQ6PF06 316 aaKnown RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 LINGO4Q6UY18 593 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 ERASQ7Z444 233 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 PIGWQ7Z7B1 504 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 CALHM1Q8IU99 346 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 NAXDQ8IW45 347 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 BOD1L2Q8IYS8 172 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 METTL4Q8N3J2 472 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 LRRC18Q8N456 261 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 SIRT6Q8N6T7 355 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 PTGR2Q8N8N7 351 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 OR51A7Q8NH64 312 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms