RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 NFYCQ13952 458 aa28.16■■■□□ 2.1
CSNK1E-206ENST00000413574 BCORP1Q8N888 145 aa28.16■■■□□ 2.1
CSNK1E-206ENST00000413574 COX18Q8N8Q8 333 aa28.16■■■□□ 2.1
CSNK1E-206ENST00000413574 RP9Q8TA86 221 aaKnown RBP28.16■■■□□ 2.1
CSNK1E-206ENST00000413574 EFHD2Q96C19 240 aaPredicted RBP28.16■■■□□ 2.1
CSNK1E-206ENST00000413574 KLHL1Q9NR64 748 aa28.16■■■□□ 2.1
CSNK1E-206ENST00000413574 TRBV5-3A0A0A0MS03 114 aa28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 REM1O75628 298 aa28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 PPM1BO75688 479 aa28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 UNC5CO95185 931 aa28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 IGKV1D-16P01601 117 aa28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 MVDP53602 400 aa28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 MRPS22P82650 360 aaKnown RBP28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 NTRK2Q16620 822 aa28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 DDX59Q5T1V6 619 aaKnown RBP eCLIP28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 Q6ZS92 163 aa28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 MTERF4Q7Z6M4 381 aaKnown RBP28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 HPS6Q86YV9 775 aa28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 HORMAD2Q8N7B1 307 aa28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 RAB8BQ92930 207 aa28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 ADOQ96SZ5 270 aa28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 STACQ99469 402 aa28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 TRIM8Q9BZR9 551 aa28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 RALYQ9UKM9 306 aaKnown RBP28.15■■■□□ 2.1
CSNK1E-206ENST00000413574 TTC36A6NLP5 189 aa28.14■■■□□ 2.1
CSNK1E-206ENST00000413574 CLIC1O00299 241 aa28.14■■■□□ 2.1
CSNK1E-206ENST00000413574 MRASO14807 208 aa28.14■■■□□ 2.1
CSNK1E-206ENST00000413574 OR12D1P0DN82 309 aa28.14■■■□□ 2.1
CSNK1E-206ENST00000413574 PIGAP37287 484 aa28.14■■■□□ 2.1
CSNK1E-206ENST00000413574 PLEKHN1Q494U1 663 aaPredicted RBP28.14■■■□□ 2.1
CSNK1E-206ENST00000413574 CYP27C1Q4G0S4 372 aa28.14■■■□□ 2.1
CSNK1E-206ENST00000413574 CCNJQ5T5M9 372 aa28.14■■■□□ 2.1
CSNK1E-206ENST00000413574 SLC6A19Q695T7 634 aa28.14■■■□□ 2.1
CSNK1E-206ENST00000413574 FIGNL1Q6PIW4 674 aa28.14■■■□□ 2.1
CSNK1E-206ENST00000413574 MIPOL1Q8TD10 442 aa28.14■■■□□ 2.1
CSNK1E-206ENST00000413574 RCN3Q96D15 328 aa28.14■■■□□ 2.1
CSNK1E-206ENST00000413574 DUSP22Q9NRW4 184 aa28.14■■■□□ 2.1
CSNK1E-206ENST00000413574 FBXO34Q9NWN3 711 aa28.14■■■□□ 2.1
CSNK1E-206ENST00000413574 B3GNT3Q9Y2A9 372 aa28.14■■■□□ 2.1
CSNK1E-206ENST00000413574 PRRC2CQ9Y520 2896 aaKnown RBP28.14■■■□□ 2.1
CSNK1E-206ENST00000413574 TSPAN2O60636 221 aa28.14■■■□□ 2.09
CSNK1E-206ENST00000413574 UGT2B11O75310 529 aa28.14■■■□□ 2.09
CSNK1E-206ENST00000413574 SLC25A12O75746 678 aa28.14■■■□□ 2.09
CSNK1E-206ENST00000413574 KRT75O95678 551 aa28.14■■■□□ 2.09
CSNK1E-206ENST00000413574 KRT16P08779 473 aa28.14■■■□□ 2.09
CSNK1E-206ENST00000413574 STX5Q13190 355 aa28.14■■■□□ 2.09
CSNK1E-206ENST00000413574 CAPRIN1Q14444 709 aaKnown RBP28.14■■■□□ 2.09
CSNK1E-206ENST00000413574 GPALPP1Q8IXQ4 340 aa28.14■■■□□ 2.09
CSNK1E-206ENST00000413574 FITM2Q8N6M3 262 aa28.14■■■□□ 2.09
CSNK1E-206ENST00000413574 IKZF5Q9H5V7 419 aa28.14■■■□□ 2.09
CSNK1E-206ENST00000413574 NIPSNAP3AQ9UFN0 247 aaPredicted RBP28.14■■■□□ 2.09
CSNK1E-206ENST00000413574 BBIP1A8MTZ0 92 aa28.13■■■□□ 2.09
CSNK1E-206ENST00000413574 KCNK2O95069 426 aa28.13■■■□□ 2.09
CSNK1E-206ENST00000413574 CCL3P10147 92 aa28.13■■■□□ 2.09
CSNK1E-206ENST00000413574 DECR1Q16698 335 aa28.13■■■□□ 2.09
CSNK1E-206ENST00000413574 RTL4Q6ZR62 310 aa28.13■■■□□ 2.09
CSNK1E-206ENST00000413574 SLC39A3Q9BRY0 314 aa28.13■■■□□ 2.09
CSNK1E-206ENST00000413574 BTBD2Q9BX70 525 aa28.13■■■□□ 2.09
CSNK1E-206ENST00000413574 GIN1Q9NXP7 522 aa28.13■■■□□ 2.09
CSNK1E-206ENST00000413574 CHD6Q8TD26 2715 aa28.13■■■□□ 2.09
CSNK1E-206ENST00000413574 CDK2AP1O14519 115 aa28.12■■■□□ 2.09
CSNK1E-206ENST00000413574 NAGAP17050 411 aa28.12■■■□□ 2.09
CSNK1E-206ENST00000413574 IL12BP29460 328 aa28.12■■■□□ 2.09
CSNK1E-206ENST00000413574 KRT20P35900 424 aa28.12■■■□□ 2.09
CSNK1E-206ENST00000413574 TMED10P49755 219 aaKnown RBP28.12■■■□□ 2.09
CSNK1E-206ENST00000413574 POU6F2P78424 691 aaPredicted RBP28.12■■■□□ 2.09
CSNK1E-206ENST00000413574 ZNF169Q14929 603 aaPredicted RBP28.12■■■□□ 2.09
CSNK1E-206ENST00000413574 ZNF766Q5HY98 468 aa28.12■■■□□ 2.09
CSNK1E-206ENST00000413574 TEX19Q8NA77 164 aa28.12■■■□□ 2.09
CSNK1E-206ENST00000413574 PSD4Q8NDX1 1056 aa28.12■■■□□ 2.09
CSNK1E-206ENST00000413574 XAGE5Q8WWM1 108 aa28.12■■■□□ 2.09
CSNK1E-206ENST00000413574 DIO2Q92813 273 aa28.12■■■□□ 2.09
CSNK1E-206ENST00000413574 COL21A1Q96P44 957 aa28.12■■■□□ 2.09
CSNK1E-206ENST00000413574 CGREF1Q99674 301 aa28.12■■■□□ 2.09
CSNK1E-206ENST00000413574 CHCHD2Q9Y6H1 151 aaPredicted RBP28.12■■■□□ 2.09
CSNK1E-206ENST00000413574 TRAV17A0A0B4J275 112 aa28.11■■■□□ 2.09
CSNK1E-206ENST00000413574 G3V3Y1 287 aa28.11■■■□□ 2.09
CSNK1E-206ENST00000413574 HMGN4O00479 90 aa28.11■■■□□ 2.09
CSNK1E-206ENST00000413574 SP1P08047 785 aa28.11■■■□□ 2.09
CSNK1E-206ENST00000413574 ETFAP13804 333 aa28.11■■■□□ 2.09
CSNK1E-206ENST00000413574 CRATP43155 626 aa28.11■■■□□ 2.09
CSNK1E-206ENST00000413574 KHKP50053 298 aa28.11■■■□□ 2.09
CSNK1E-206ENST00000413574 COQ5Q5HYK3 327 aa28.11■■■□□ 2.09
CSNK1E-206ENST00000413574 OLIG3Q7RTU3 272 aa28.11■■■□□ 2.09
CSNK1E-206ENST00000413574 ZAR1Q86SH2 424 aa28.11■■■□□ 2.09
CSNK1E-206ENST00000413574 C10orf111Q8N326 155 aa28.11■■■□□ 2.09
CSNK1E-206ENST00000413574 SLC39A7Q92504 469 aa28.11■■■□□ 2.09
CSNK1E-206ENST00000413574 HGDQ93099 445 aa28.11■■■□□ 2.09
CSNK1E-206ENST00000413574 TMEM125Q96AQ2 219 aa28.11■■■□□ 2.09
CSNK1E-206ENST00000413574 SGCZQ96LD1 299 aa28.11■■■□□ 2.09
CSNK1E-206ENST00000413574 SH2D2AQ9NP31 389 aa28.11■■■□□ 2.09
CSNK1E-206ENST00000413574 OR6C70A6NIJ9 312 aa28.1■■■□□ 2.09
CSNK1E-206ENST00000413574 AIM2O14862 343 aa28.1■■■□□ 2.09
CSNK1E-206ENST00000413574 CD46P15529 392 aa28.1■■■□□ 2.09
CSNK1E-206ENST00000413574 TRMT5Q32P41 509 aaKnown RBP28.1■■■□□ 2.09
CSNK1E-206ENST00000413574 RUNDC3AQ59EK9 446 aa28.1■■■□□ 2.09
CSNK1E-206ENST00000413574 BICRALQ6AI39 1079 aa28.1■■■□□ 2.09
CSNK1E-206ENST00000413574 SLC25A25Q6KCM7 469 aa28.1■■■□□ 2.09
CSNK1E-206ENST00000413574 DND1Q8IYX4 353 aaKnown RBP28.1■■■□□ 2.09
CSNK1E-206ENST00000413574 OR52N2Q8NGI0 321 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms