RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 POP7O75817 140 aaKnown RBP16.55■□□□□ 0.24
SDCBP-202ENST00000413219 NFATC1O95644 943 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 LRG1P02750 347 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 CXCL10P02778 98 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 CD8BP10966 210 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 GJA1P17302 382 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 HOXD10P28358 340 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 RBMS1P29558 406 aaKnown RBP16.55■□□□□ 0.24
SDCBP-202ENST00000413219 TALDO1P37837 337 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 OMPP47874 163 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 PER3P56645 1201 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 GRIN2CQ14957 1233 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 BHLHB9Q6PI77 547 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 ZNF322Q6U7Q0 402 aaPredicted RBP16.55■□□□□ 0.24
SDCBP-202ENST00000413219 DCUN1D3Q8IWE4 304 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 OR4M2Q8NGB6 313 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 MYLIPQ8WY64 445 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 SCMH1Q96GD3 660 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 SECISBP2Q96T21 854 aaKnown RBP16.55■□□□□ 0.24
SDCBP-202ENST00000413219 ARHGDIGQ99819 225 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 OR52A5Q9H2C5 316 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 DDX31Q9H8H2 851 aaKnown RBP16.55■□□□□ 0.24
SDCBP-202ENST00000413219 MARK1Q9P0L2 795 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 PRKAG2Q9UGJ0 569 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 ASF1AQ9Y294 204 aa16.55■□□□□ 0.24
SDCBP-202ENST00000413219 A0A0A6YYJ9 748 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 C2orf92A0A1B0GVN3 265 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 GTPBP1O00178 669 aaKnown RBP16.54■□□□□ 0.24
SDCBP-202ENST00000413219 TEX28O15482 410 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 PAPLNO95428 1278 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 TYRP14679 529 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 SYN1P17600 705 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 FPR3P25089 353 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 HSD17B2P37059 387 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 CCR8P51685 355 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 SHC2P98077 582 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 FUT5Q11128 374 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 ST3GAL3Q11203 375 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 ZNF791Q3KP31 576 aaPredicted RBP16.54■□□□□ 0.24
SDCBP-202ENST00000413219 FAM205BPQ63HN1 556 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 LHX8Q68G74 356 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 PARS2Q7L3T8 475 aaKnown RBP16.54■□□□□ 0.24
SDCBP-202ENST00000413219 SZRD1Q7Z422 152 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 ZNF547Q8IVP9 402 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 OR8H1Q8NGG4 311 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 DIO2Q92813 273 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 THAP7Q9BT49 309 aaPredicted RBP16.54■□□□□ 0.24
SDCBP-202ENST00000413219 ACAT2Q9BWD1 397 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 PCBD2Q9H0N5 130 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 CTPS2Q9NRF8 586 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.54■□□□□ 0.24
SDCBP-202ENST00000413219 IL20Q9NYY1 176 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 EIF3KQ9UBQ5 218 aaKnown RBP16.54■□□□□ 0.24
SDCBP-202ENST00000413219 KCNN3Q9UGI6 736 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 SRRDQ9UH36 339 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 TAC3Q9UHF0 121 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 ITM2BQ9Y287 266 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 PLXND1Q9Y4D7 1925 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 SLC22A5O76082 557 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 TRIM23P36406 574 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 RIPPLY1Q0D2K3 151 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 MAP4K2Q12851 820 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 FCN2Q15485 313 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 RAET1GQ6H3X3 334 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.54■□□□□ 0.24
SDCBP-202ENST00000413219 RRM2BQ7LG56 351 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 OR4Q3Q8NH05 313 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 CYB5D2Q8WUJ1 264 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 SLC35C2Q9NQQ7 365 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 CCL26Q9Y258 94 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 RNF215Q9Y6U7 377 aa16.54■□□□□ 0.24
SDCBP-202ENST00000413219 RNF13O43567 381 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 HRO43593 1189 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 STOMP27105 288 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 NTSP30990 170 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 VASPP50552 380 aaPredicted RBP16.53■□□□□ 0.24
SDCBP-202ENST00000413219 RPA4Q13156 261 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 LRRC32Q14392 662 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 ARHGEF6Q15052 776 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 PGGHGQ32M88 737 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 IDNKQ5T6J7 187 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 UBE3DQ7Z6J8 389 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 MEX3DQ86XN8 651 aaKnown RBP16.53■□□□□ 0.24
SDCBP-202ENST00000413219 C2orf73Q8N5S3 287 aaPredicted RBP16.53■□□□□ 0.24
SDCBP-202ENST00000413219 SPERTQ8NA61 448 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 OR5AR1Q8NGP9 310 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 ZNF431Q8TF32 576 aaPredicted RBP16.53■□□□□ 0.24
SDCBP-202ENST00000413219 FAM46AQ96IP4 442 aaKnown RBP16.53■□□□□ 0.24
SDCBP-202ENST00000413219 GHITMQ9H3K2 345 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 RRAGCQ9HB90 399 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 SPHK2Q9NRA0 654 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 IMP3Q9NV31 184 aaKnown RBP16.53■□□□□ 0.24
SDCBP-202ENST00000413219 CNIH4Q9P003 139 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 PTGFRNQ9P2B2 879 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 TNFRSF10DQ9UBN6 386 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 PLAGL1Q9UM63 463 aa16.53■□□□□ 0.24
SDCBP-202ENST00000413219 A0A0A6YYD5 115 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 CARNS1A5YM72 827 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 J3QRE1 110 aa16.52■□□□□ 0.24
SDCBP-202ENST00000413219 VEGFDO43915 354 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms