RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 POU6F2P78424 691 aaPredicted RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 VLDLRP98155 873 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 NHLH1Q02575 133 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 CHRNEQ04844 493 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 EBPQ15125 230 aaKnown RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 NNATQ16517 81 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 DUSP7Q16829 419 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 IQCCQ4KMZ1 466 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 IFI44LQ53G44 452 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 SFT2D3Q587I9 215 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 CCNJQ5T5M9 372 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 TYW3Q6IPR3 259 aaKnown RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 FAM199XQ6PEV8 388 aaPredicted RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 TMEM205Q6UW68 189 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 C6orf15Q6UXA7 325 aaPredicted RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 FKBP9P1Q75LS8 142 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 PIWIL3Q7Z3Z3 882 aaKnown RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 AMIGO2Q86SJ2 522 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 EPHX4Q8IUS5 362 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 C9orf40Q8IXQ3 194 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 KBTBD2Q8IY47 623 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 CACTIN-AS1Q8N1I8 211 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 ZSCAN1Q8NBB4 408 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 MORN4Q8NDC4 146 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 GPR32P1Q8NGA4 272 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 OR1N1Q8NGS0 311 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 SPPL2AQ8TCT8 520 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 GPR151Q8TDV0 419 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 APOBEC4Q8WW27 367 aaKnown RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 RASSF5Q8WWW0 418 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 METTL21AQ8WXB1 218 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 RMND5BQ96G75 393 aaPredicted RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 CENPNQ96H22 339 aaPredicted RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 SENP5Q96HI0 755 aaPredicted RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 C7orf34Q96L11 122 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 SLC46A1Q96NT5 459 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 SDF2Q99470 211 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 WDR77Q9BQA1 342 aaPredicted RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 MESP1Q9BRJ9 268 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 SPATA5L1Q9BVQ7 753 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 RSPO3Q9BXY4 272 aaPredicted RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 SPRY4Q9C004 299 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 OR8D2Q9GZM6 311 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 QRSL1Q9H0R6 528 aaKnown RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 VCX3BQ9H321 246 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 Q9N2J8 555 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 IL1RAPQ9NPH3 570 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 POLE3Q9NRF9 147 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 THSD1Q9NS62 852 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 COPS7AQ9UBW8 275 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 SEC14L3Q9UDX4 400 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 C19orf25Q9UFG5 118 aaPredicted RBP6.17□□□□□ -1.42
VPS41-204ENST00000413141 BAG5Q9UL15 447 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 ABCG2Q9UNQ0 655 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 PADI2Q9Y2J8 665 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 WDR45Q9Y484 360 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 WDFY3Q8IZQ1 3526 aa6.17□□□□□ -1.42
VPS41-204ENST00000413141 EP300Q09472 2414 aaPredicted RBP6.16□□□□□ -1.42
VPS41-204ENST00000413141 KIF26BQ2KJY2 2108 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 LOC102723996A0A087X1L8 192 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 IGHV3-20A0A0C4DH32 117 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 CENPVL1A0A0U1RR11 272 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 PRAMEF25A6NGN4 478 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 FRG2CA6NGY1 282 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 AGAP5A6NIR3 686 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 SAC3D1A6NKF1 404 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 OR6C76A6NM76 312 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 TM4SF5O14894 197 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 PEX1O43933 1283 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 STX11O75558 287 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 KLF7O75840 302 aaPredicted RBP6.16□□□□□ -1.42
VPS41-204ENST00000413141 SOX30O94993 753 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 KCNK2O95069 426 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 EPPINO95925 133 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 CST1P01037 141 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 ALPPP05187 535 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 FESP07332 822 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 UMODP07911 640 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 GUSBP08236 651 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 CT45A8P0DMV1 189 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 CT45A9P0DMV2 189 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 CEACAM1P13688 526 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 PRKAR1BP31321 381 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 PIGAP37287 484 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 FOLR3P41439 243 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 OR1E2P47887 323 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 NOVA1P51513 510 aaKnown RBP6.16□□□□□ -1.42
VPS41-204ENST00000413141 GPR143P51810 404 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 KCNC4Q03721 635 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 TARDBPQ13148 414 aaKnown RBP eCLIP6.16□□□□□ -1.42
VPS41-204ENST00000413141 LRRC36Q1X8D7 754 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 GRAMD1BQ3KR37 738 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 CYP27C1Q4G0S4 372 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 CT45A2Q5DJT8 189 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 TMEM164Q5U3C3 297 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 FAM69BQ5VUD6 431 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 FIGNL1Q6PIW4 674 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 PAPD4Q6PIY7 484 aaKnown RBP6.16□□□□□ -1.42
VPS41-204ENST00000413141 DHRS4L2Q6PKH6 230 aa6.16□□□□□ -1.42
VPS41-204ENST00000413141 IZUMO2Q6UXV1 221 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms