RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 SERHLQ9NQF3 203 aa17.38■□□□□ 0.37
SF3A1-202ENST00000411423 NPDC1Q9NQX5 325 aaPredicted RBP17.38■□□□□ 0.37
SF3A1-202ENST00000411423 ALKBH4Q9NXW9 302 aa17.38■□□□□ 0.37
SF3A1-202ENST00000411423 KLRF1Q9NZS2 232 aa17.38■□□□□ 0.37
SF3A1-202ENST00000411423 FBXL2Q9UKC9 423 aa17.38■□□□□ 0.37
SF3A1-202ENST00000411423 C15orf38-AP3S2A0A0A6YYH1 394 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 A0A0G2JNJ9 132 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 FIGNL2A6NMB9 653 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 FAM90A27PA6NNH2 459 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 PDPK1O15530 556 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 COQ9O75208 318 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 TOXO94900 526 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 CYP4B1P13584 511 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 SERPINB5P36952 375 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 SNTA1Q13424 505 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 B3GNT6Q6ZMB0 384 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 NUDCD3Q8IVD9 361 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 MCEMP1Q8IX19 187 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 ZNF295-AS1Q8N0V1 137 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 LIX1Q8N485 282 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 PPCDCQ96CD2 204 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 C1orf50Q9BV19 199 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 TRIM8Q9BZR9 551 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 SSU72Q9NP77 194 aaKnown RBP17.37■□□□□ 0.37
SF3A1-202ENST00000411423 CHST11Q9NPF2 352 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 DDX18Q9NVP1 670 aaKnown RBP17.37■□□□□ 0.37
SF3A1-202ENST00000411423 COQ3Q9NZJ6 369 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 Q9UFV3 132 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 TMED5Q9Y3A6 229 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 CSMD1Q96PZ7 3565 aa17.37■□□□□ 0.37
SF3A1-202ENST00000411423 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 GXYLT2A0PJZ3 443 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 WDR1O75083 606 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 IGKV1D-16P01601 117 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 BMP7P18075 431 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 ELAVL4P26378 380 aaKnown RBP17.36■□□□□ 0.37
SF3A1-202ENST00000411423 CHRNB4P30926 498 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 MAP3K8P41279 467 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 PNLIPRP2P54317 469 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 TOMM20Q15388 145 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 CHI3L2Q15782 390 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 C6orf136Q5SQH8 315 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 VASNQ6EMK4 673 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 OR5M10Q6IEU7 315 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 ZNF781Q8N8C0 355 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 OR7A2PQ8NGA2 310 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 LILRB4Q8NHJ6 448 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 HOXB13Q92826 284 aaPredicted RBP17.36■□□□□ 0.37
SF3A1-202ENST00000411423 GIMAP5Q96F15 307 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 SORT1Q99523 831 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 LMF2Q9BU23 707 aaKnown RBP17.36■□□□□ 0.37
SF3A1-202ENST00000411423 UGT2B28Q9BY64 529 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 SH3BP4Q9P0V3 963 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 WIF1Q9Y5W5 379 aa17.36■□□□□ 0.37
SF3A1-202ENST00000411423 CSMD2Q7Z408 3487 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 LRBAP50851 2863 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 SLITRK5O94991 958 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 IL12BP29460 328 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 PTGR1Q14914 329 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 NHSL2Q5HYW2 709 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 ACAD11Q709F0 780 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 NAXEQ8NCW5 288 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 PIK3R3Q92569 461 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 TMCO6Q96DC7 493 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 WDYHV1Q96HA8 205 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 PPP3R2Q96LZ3 170 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 PRDM14Q9GZV8 571 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 CENPHQ9H3R5 247 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 EQTNQ9NQ60 294 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 SIRT3Q9NTG7 399 aaPredicted RBP17.35■□□□□ 0.37
SF3A1-202ENST00000411423 ATP6V1HQ9UI12 483 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 CBLCQ9ULV8 474 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 OR10H1Q9Y4A9 318 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 HCFC1P51610 2035 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 MED12Q93074 2177 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 NOTCH2Q04721 2471 aa17.35■□□□□ 0.37
SF3A1-202ENST00000411423 APCP25054 2843 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 SCAMP2O15127 329 aaKnown RBP17.34■□□□□ 0.37
SF3A1-202ENST00000411423 FADS1O60427 444 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 ABCB7O75027 752 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 SERPINE1P05121 402 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 IFI6P09912 130 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 LAMP1P11279 417 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 COX6B1P14854 86 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 BGNP21810 368 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 EFR3AQ14156 821 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 ACSF3Q4G176 576 aaPredicted RBP17.34■□□□□ 0.37
SF3A1-202ENST00000411423 PLCZ1Q86YW0 608 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 KRTCAP2Q8N6L1 136 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 OR10Q1Q8NGQ4 319 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 ASB5Q8WWX0 329 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 OTUB1Q96FW1 271 aaPredicted RBP17.34■□□□□ 0.37
SF3A1-202ENST00000411423 PPP1R36Q96LQ0 422 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 TREX2Q9BQ50 279 aaPredicted RBP17.34■□□□□ 0.37
SF3A1-202ENST00000411423 OR2B2Q9GZK3 357 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 ENKD1Q9H0I2 346 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 NTMQ9P121 344 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 PCDHGB3Q9Y5G1 929 aa17.34■□□□□ 0.37
SF3A1-202ENST00000411423 ARHGAP21Q5T5U3 1957 aa17.33■□□□□ 0.37
SF3A1-202ENST00000411423 SCO2O43819 266 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms