RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SLC22A1O15245 554 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 EMC8O43402 210 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 DFNA5O60443 496 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 HAPLN1P10915 354 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 MC3RP41968 323 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 CAMLGP49069 296 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 SCCPDHQ8NBX0 429 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 TSPEARQ8WU66 669 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 SCAMP4Q969E2 229 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 DOHHQ9BU89 302 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 SYT4Q9H2B2 425 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 FAM120CQ9NX05 1096 aaKnown RBP10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 ZIM2Q9NZV7 527 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 OARD1Q9Y530 152 aa10.68□□□□□ -0.7
PRPF40A-202ENST00000410080 LCHNA4D1U4 455 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 D6RAR5 112 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 CAPN3P20807 821 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 HOXA9P31269 272 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 SIRPAP78324 504 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 SCAPQ12770 1279 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 PDE7AQ13946 482 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 TGFBIQ15582 683 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 GSG1LQ6UXU4 331 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 IGSF21Q96ID5 467 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 TMEM248Q9NWD8 314 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 PHIPQ8WWQ0 1821 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 F5H0A9 414 aaPredicted RBP10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 CREB1P16220 341 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 ITGB8P26012 769 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 ADH6P28332 368 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 CREBZFQ9NS37 354 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 SDHAF2Q9NX18 166 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 DOCK5Q9H7D0 1870 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 CRYM-AS1A6NIL9 109 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 PRKACGP22612 351 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 CD79BP40259 229 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 RAD52P43351 418 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 EIF2B1Q14232 305 aaKnown RBP10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 LHFPL3Q86UP9 236 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 PHC2Q8IXK0 858 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 LRRC57Q8N9N7 239 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 DMBX1Q8NFW5 382 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 PIGCQ92535 297 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 LRIG1Q96JA1 1093 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 CGREF1Q99674 301 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 VRK1Q99986 396 aaPredicted RBP10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 SLC45A1Q9Y2W3 748 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 PCDHGA1Q9Y5H4 931 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 PAX6P26367 422 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 XCR1P46094 333 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 P2RX1P51575 399 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 MYBPHQ13203 477 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 TRAM1Q15629 374 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 UPP1Q16831 310 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 HYAL4Q2M3T9 481 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 RPL13AP3Q6NVV1 102 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 KIAA0907Q7Z7F0 614 aaPredicted RBP10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 SLC22A16Q86VW1 577 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 DCAF4L2Q8NA75 395 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 TOE1Q96GM8 510 aaKnown RBP10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 F2RL3Q96RI0 385 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 MYNNQ9NPC7 610 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 SIX2Q9NPC8 291 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 KCND1Q9NSA2 647 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 MAGEA6P43360 314 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 SPANXN4Q5MJ08 99 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 NTAN1Q96AB6 310 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 FOXN4Q96NZ1 517 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 CDC6Q99741 560 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 TUBG2Q9NRH3 451 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 MKLN1Q9UL63 735 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 KNL1Q8NG31 2342 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 PIGBOS1A0A0B4J2F0 54 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 DVL1O14640 695 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 PMM2O15305 246 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 CELP19835 753 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 STT3AP46977 705 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 DVL1P1P54792 670 aaPredicted RBP10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 FBXO43Q4G163 708 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 FIGLAQ6QHK4 219 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 RABEPKQ7Z6M1 372 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 S100A7AQ86SG5 101 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 TOMM40LQ969M1 308 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 RAB39BQ96DA2 213 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 SGTBQ96EQ0 304 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 EMC3Q9P0I2 261 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 RHBDD3Q9Y3P4 386 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 FER1L5A0AVI2 2057 aa10.67□□□□□ -0.7
PRPF40A-202ENST00000410080 A8MT66 165 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 TIMP1P01033 207 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 PABPC4LP0CB38 370 aaKnown RBP10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 HOXA1P49639 335 aaPredicted RBP10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 NDUFA6P56556 154 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 CDK3Q00526 305 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 ARHGAP19Q14CB8 494 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 PTPRRQ15256 657 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 KLBQ86Z14 1044 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 BEST3Q8N1M1 668 aa10.66□□□□□ -0.7
PRPF40A-202ENST00000410080 DERL2Q9GZP9 239 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms