RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 TOX3O15405 576 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 ZNF749O43361 778 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 SEMA7AO75326 666 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 ZIC2O95409 532 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 EPPINO95925 133 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 CBX7O95931 251 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 AK1P00568 194 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 PRKAR1BP31321 381 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 GRK6P43250 576 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 GCGRP47871 477 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 CLK3P49761 638 aaKnown RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 HSD17B7P56937 341 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 ISL1P61371 349 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 SYT16Q17RD7 645 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 MLIPQ5VWP3 458 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 DEF8Q6ZN54 512 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 MED25Q71SY5 747 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 COMTD1Q86VU5 262 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 RBM45Q8IUH3 476 aaKnown RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 LACC1Q8IV20 430 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 GALNT12Q8IXK2 581 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 TAGAPQ8N103 731 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 FAM181AQ8N9Y4 354 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 FBLIM1Q8WUP2 373 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 HDAC2Q92769 488 aaKnown RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 ALPK1Q96QP1 1244 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 PITX2Q99697 317 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 ARHGDIGQ99819 225 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 ZNF768Q9H5H4 540 aaKnown RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 MTHFD2LQ9H903 347 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 CXorf21Q9HAI6 301 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 NMNAT1Q9HAN9 279 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 PAPOLBQ9NRJ5 636 aaKnown RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 NDUFA13Q9P0J0 144 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 NDRG4Q9ULP0 352 aaKnown RBP13.13□□□□□ -0.31
LIMS2-206ENST00000409754 POFUT2Q9Y2G5 429 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 IFT52Q9Y366 437 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 CCDC88CQ9P219 2028 aa13.13□□□□□ -0.31
LIMS2-206ENST00000409754 SMIM31A0A1B0GVY4 71 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 DCDC2BA2VCK2 349 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 EME2A4GXA9 379 aaPredicted RBP13.12□□□□□ -0.31
LIMS2-206ENST00000409754 TGFBR3LH3BV60 316 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 M0R3H8 397 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 OXSR1O95747 527 aaPredicted RBP13.12□□□□□ -0.31
LIMS2-206ENST00000409754 H1F0P07305 194 aaKnown RBP13.12□□□□□ -0.31
LIMS2-206ENST00000409754 HLCSP50747 726 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 CD47Q08722 323 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 NPRL3Q12980 569 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 BIKQ13323 160 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 EXOSC7Q15024 291 aaKnown RBP13.12□□□□□ -0.31
LIMS2-206ENST00000409754 RBM48Q5RL73 367 aaKnown RBP13.12□□□□□ -0.31
LIMS2-206ENST00000409754 SNAP47Q5SQN1 464 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 FOXB2Q5VYV0 432 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 TYW3Q6IPR3 259 aaKnown RBP13.12□□□□□ -0.31
LIMS2-206ENST00000409754 TMEM71Q6P5X7 295 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 DGAT2L6Q6ZPD8 337 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 OR52P1PQ8NH57 321 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 OR1L3Q8NH93 324 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 DOK4Q8TEW6 326 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 NR4A3Q92570 626 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 RBM18Q96H35 190 aaKnown RBP13.12□□□□□ -0.31
LIMS2-206ENST00000409754 DGAT2Q96PD7 388 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 SDF2Q99470 211 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 APOL4Q9BPW4 351 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 WFDC6Q9BQY6 131 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 ALOXE3Q9BYJ1 711 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 ZNF350Q9GZX5 532 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 QRSL1Q9H0R6 528 aaKnown RBP13.12□□□□□ -0.31
LIMS2-206ENST00000409754 ZNF556Q9HAH1 456 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 CACYBPQ9HB71 228 aaKnown RBP13.12□□□□□ -0.31
LIMS2-206ENST00000409754 RHCGQ9UBD6 479 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 SLC13A4Q9UKG4 626 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 TMCC3Q9ULS5 477 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 A4GNTQ9UNA3 340 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 WDR45Q9Y484 360 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 TMEM184BQ9Y519 407 aaPredicted RBP13.12□□□□□ -0.31
LIMS2-206ENST00000409754 CLDN16Q9Y5I7 305 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 GMPPBQ9Y5P6 360 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 ASPMQ8IZT6 3477 aa13.12□□□□□ -0.31
LIMS2-206ENST00000409754 NCOR2Q9Y618 2525 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 SCN2AQ99250 2005 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 SPAARA0A1B0GVQ0 90 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 FAAHO00519 579 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 FCMRO60667 390 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 CYP4B1P13584 511 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 FOLR1P15328 257 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 CSRP1P21291 193 aaKnown RBP13.11□□□□□ -0.31
LIMS2-206ENST00000409754 S1PR1P21453 382 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 CBLP22681 906 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 ELAVL4P26378 380 aaKnown RBP13.11□□□□□ -0.31
LIMS2-206ENST00000409754 ELK4P28324 431 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 GALNSP34059 522 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 STT3AP46977 705 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 CDH15P55291 814 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 TOP3AQ13472 1001 aaPredicted RBP13.11□□□□□ -0.31
LIMS2-206ENST00000409754 RAPSNQ13702 412 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 SERTAD2Q14140 314 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 C6orf141Q5SZD1 244 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 DCST2Q5T1A1 773 aa13.11□□□□□ -0.31
LIMS2-206ENST00000409754 YOD1Q5VVQ6 348 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms