RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 WDR5P61964 334 aaKnown RBP5.79□□□□□ -1.48
SCN1A-203ENST00000409050 CSNK2A1P68400 391 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-203ENST00000409050 HSPB2Q16082 182 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 MSS51Q4VC12 460 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 UEVLDQ8IX04 471 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 SLC35F2Q8IXU6 374 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 ANKK1Q8NFD2 765 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 LMO3Q8TAP4 145 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 NANPQ8TBE9 248 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 CCDC120Q96HB5 630 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 PRAP1Q96NZ9 151 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 HBEGFQ99075 208 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 TESQ9UGI8 421 aaKnown RBP5.79□□□□□ -1.48
SCN1A-203ENST00000409050 SARDHQ9UL12 918 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 FAM155AB1AL88 458 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-203ENST00000409050 TMEM189-UBE2V1I3L0A0 370 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 CCL22O00626 93 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 MED6O75586 246 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 AMY2AP04746 511 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 ICAM2P13598 275 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 GABRA3P34903 492 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 ACVRL1P37023 503 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 PREPP48147 710 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 DNASE1L3Q13609 305 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 PTPRCAPQ14761 206 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 RGNQ15493 299 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 PRRT3Q5FWE3 981 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 ATAD3CQ5T2N8 411 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 KIAA1211LQ6NV74 962 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 RPL22L1Q6P5R6 122 aaKnown RBP5.79□□□□□ -1.48
SCN1A-203ENST00000409050 RBMS3Q6XE24 437 aaKnown RBP5.79□□□□□ -1.48
SCN1A-203ENST00000409050 CPXM2Q8N436 756 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 C2orf73Q8N5S3 287 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-203ENST00000409050 OR9A2Q8NGT5 310 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 FIBINQ8TAL6 211 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 ACOT11Q8WXI4 607 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-203ENST00000409050 NDRG1Q92597 394 aaKnown RBP5.79□□□□□ -1.48
SCN1A-203ENST00000409050 TFAP2CQ92754 450 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 ELMOD3Q96FG2 381 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 DHRS4Q9BTZ2 278 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 CPEB1Q9BZB8 566 aaKnown RBP5.79□□□□□ -1.48
SCN1A-203ENST00000409050 MKRN2Q9H000 416 aaKnown RBP5.79□□□□□ -1.48
SCN1A-203ENST00000409050 SPHK2Q9NRA0 654 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 AGPAT4Q9NRZ5 378 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 QPCTLQ9NXS2 382 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 LRFN1Q9P244 771 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 MYOTQ9UBF9 498 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 ADAMTS6Q9UKP5 1117 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 INTS6Q9UL03 887 aaKnown RBP5.79□□□□□ -1.48
SCN1A-203ENST00000409050 A0A1W2PS29 197 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 F8W036 122 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 MAFKO60675 156 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 SLC22A5O76082 557 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 RAB3DO95716 219 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 CD53P19397 219 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 DCTP40126 519 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 HTR2BP41595 481 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 TSFMP43897 325 aaKnown RBP5.79□□□□□ -1.48
SCN1A-203ENST00000409050 STK19P49842 368 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-203ENST00000409050 RAB8AP61006 207 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 RELAQ04206 551 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 CDK5R2Q13319 367 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 DOC2AQ14183 400 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 C22orf42Q6IC83 251 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 GPR149Q86SP6 731 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 SLC35F3Q8IY50 421 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 SCAMP5Q8TAC9 235 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 C16orf78Q8WTQ4 265 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 CHAC2Q8WUX2 184 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 GATA6Q92908 595 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 TCEAL2Q9H3H9 227 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-203ENST00000409050 CTPS2Q9NRF8 586 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 GMPR2Q9P2T1 348 aaKnown RBP5.79□□□□□ -1.48
SCN1A-203ENST00000409050 SLC2A6Q9UGQ3 507 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 CYP8B1Q9UNU6 501 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 POLHQ9Y253 713 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 FER1L4A9Z1Z3 1794 aa5.79□□□□□ -1.48
SCN1A-203ENST00000409050 VIRMAQ69YN4 1812 aaKnown RBP5.79□□□□□ -1.48
SCN1A-203ENST00000409050 ENPP3O14638 875 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 CSF2RAP15509 400 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 ELK4P28324 431 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 ALDH3B1P43353 468 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 GLO1Q04760 184 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 Q6ZVU0 165 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 LRP10Q7Z4F1 713 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 PDZD3Q86UT5 571 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 LILRB2Q8N423 598 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 CSNK1A1LQ8N752 337 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 TRMT10AQ8TBZ6 339 aaKnown RBP5.78□□□□□ -1.48
SCN1A-203ENST00000409050 SLC2A12Q8TD20 617 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 CLEC4CQ8WTT0 213 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 ESAMQ96AP7 390 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 OR10A5Q9H207 317 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 OR10A2Q9H208 303 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 PPIL3Q9H2H8 161 aaKnown RBP5.78□□□□□ -1.48
SCN1A-203ENST00000409050 LDAHQ9H6V9 325 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 ZNF442Q9H7R0 627 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 ZNF701Q9NV72 531 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-203ENST00000409050 TMLHEQ9NVH6 421 aa5.78□□□□□ -1.48
SCN1A-203ENST00000409050 RBPJLQ9UBG7 517 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms