RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 THP07101 528 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 NR2C1P13056 603 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 GSTM3P21266 225 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 PYCR1P32322 319 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 THPOP40225 353 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 OR12D2P58182 307 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 POLR2GP62487 172 aaKnown RBP eCLIP5.55□□□□□ -1.52
HDAC9-203ENST00000406072 ELAVL2Q12926 359 aaKnown RBP5.55□□□□□ -1.52
HDAC9-203ENST00000406072 HSPB3Q12988 150 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 TUSC1Q2TAM9 212 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 CARD16Q5EG05 197 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 GLT8D1Q68CQ7 371 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 FRMPD2BQ6IN97 320 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 TRMT11Q7Z4G4 463 aaKnown RBP5.55□□□□□ -1.52
HDAC9-203ENST00000406072 CLEC14AQ86T13 490 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 JAZF1Q86VZ6 243 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 CARNMT1Q8N4J0 409 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 OR8D4Q8NGM9 314 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 RHEBL1Q8TAI7 183 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 SLC35F5Q8WV83 523 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 FUBP3Q96I24 572 aaKnown RBP eCLIP5.55□□□□□ -1.52
HDAC9-203ENST00000406072 TMEM43Q9BTV4 400 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 TM6SF2Q9BZW4 377 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 ZNF385DQ9H6B1 395 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 RDH14Q9HBH5 336 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 EQTNQ9NQ60 294 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 TMEM45AQ9NWC5 275 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 VPS29Q9UBQ0 182 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 SCML2Q9UQR0 700 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 HIF3AQ9Y2N7 669 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 GPR52Q9Y2T5 361 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 PCDHB1Q9Y5F3 818 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 BACE2Q9Y5Z0 518 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 A0A1W2PRB8 838 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 CASTOR2A6NHX0 329 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 H7C1Q1 480 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 SIGLEC6O43699 453 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 GMFGO60234 142 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 RRASP10301 218 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 PSMB1P20618 241 aaKnown RBP5.55□□□□□ -1.52
HDAC9-203ENST00000406072 DLSTP36957 453 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 RABGGTBP53611 331 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 CLDN8P56748 225 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 LILRA4P59901 499 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 OR2B8PP59922 312 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 GALNT2Q10471 571 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 MLLT11Q13015 90 aaPredicted RBP5.55□□□□□ -1.52
HDAC9-203ENST00000406072 CLINT1Q14677 625 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 SLC27A4Q6P1M0 643 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 ZNF704Q6ZNC4 412 aaPredicted RBP5.55□□□□□ -1.52
HDAC9-203ENST00000406072 ZNF534Q76KX8 674 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 IQCHQ86VS3 1027 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 LRRC28Q86X40 367 aaPredicted RBP5.55□□□□□ -1.52
HDAC9-203ENST00000406072 OR4K1Q8NGD4 311 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 TSEN15Q8WW01 171 aaKnown RBP5.55□□□□□ -1.52
HDAC9-203ENST00000406072 OVCA2Q8WZ82 227 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 RAB3CQ96E17 227 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 ELP4Q96EB1 424 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 RRNAD1Q96FB5 475 aaKnown RBP5.55□□□□□ -1.52
HDAC9-203ENST00000406072 HRASLS5Q96KN8 279 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 BTN2A3PQ96KV6 586 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 ZNF251Q9BRH9 671 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 INPP5KQ9BT40 448 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 ZCCHC2Q9C0B9 1178 aaKnown RBP5.55□□□□□ -1.52
HDAC9-203ENST00000406072 FAM120CQ9NX05 1096 aaKnown RBP5.55□□□□□ -1.52
HDAC9-203ENST00000406072 IL20Q9NYY1 176 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 SARDHQ9UL12 918 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 ENTPD4Q9Y227 616 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 LIPT1Q9Y234 373 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 RCE1Q9Y256 329 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 NME7Q9Y5B8 376 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 PCDHGC4Q9Y5F7 938 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 PCDHGA9Q9Y5G4 932 aaKnown RBP5.55□□□□□ -1.52
HDAC9-203ENST00000406072 PRRC2BQ5JSZ5 2229 aaKnown RBP5.55□□□□□ -1.52
HDAC9-203ENST00000406072 SCN5AQ14524 2016 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 TRIP11Q15643 1979 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 CXorf51AA0A1B0GTR3 108 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 FAM170BA6NMN3 283 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 H3BSH0 61 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 TRIM77I1YAP6 450 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 SLC34A2O95436 690 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 TSPAN15O95858 294 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 SCG5P05408 212 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 BCHEP06276 602 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 RAB6AP20340 208 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 PTGER3P43115 390 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 PREPP48147 710 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 PSMD8P48556 350 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 PPT1P50897 306 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 VLDLRP98155 873 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 SOX4Q06945 474 aaPredicted RBP5.55□□□□□ -1.52
HDAC9-203ENST00000406072 NFATC4Q14934 902 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 MICAQ29983 383 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 RNF151Q2KHN1 245 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 CLLU1OSQ5K130 101 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 VASNQ6EMK4 673 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 PLBD1Q6P4A8 553 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 CLEC9AQ6UXN8 241 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 RPTNQ6XPR3 784 aa5.55□□□□□ -1.52
HDAC9-203ENST00000406072 ZNF783Q6ZMS7 281 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms