RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 A8MVJ9 347 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 C17orf105B2RV13 164 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 hCG_2039718K7EN88 272 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 RASAL1O95294 804 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 TIAF1O95411 115 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 CD247P20963 164 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 MAP3K8P41279 467 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 KCNJ5P48544 419 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 VWA2Q5GFL6 755 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 RAB11FIP2Q7L804 512 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 EPHX4Q8IUS5 362 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 CBR4Q8N4T8 237 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 PLPP5Q8NEB5 264 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 ART5Q96L15 291 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 SLC46A1Q96NT5 459 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 LMF2Q9BU23 707 aaKnown RBP19.53■□□□□ 0.72
TPM1-208ENST00000404484 SLC38A1Q9H2H9 487 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 LRCH1Q9Y2L9 728 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 KCNE3Q9Y6H6 103 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 DSPPQ9NZW4 1301 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 AHCTF1Q8WYP5 2266 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 PLD2O14939 933 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 DXOO77932 396 aaKnown RBP19.53■□□□□ 0.72
TPM1-208ENST00000404484 NKX2-2O95096 273 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 IFNW1P05000 195 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 ALPPP05187 535 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 ATXN8OSP0DMR3 200 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 AGXTP21549 392 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 PGDP52209 483 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 ARHGDIAP52565 204 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 MLIPQ5VWP3 458 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 HIPK1Q86Z02 1210 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 SIMC1Q8NDZ2 872 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 OR5K1Q8NHB7 308 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 STT3BQ8TCJ2 826 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 GPR151Q8TDV0 419 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 DOK4Q8TEW6 326 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 PMM1Q92871 262 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 FKBP10Q96AY3 582 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 FBXL20Q96IG2 436 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 ZNF354BQ96LW1 612 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 OSBPL10Q9BXB5 764 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 MTHFD2LQ9H903 347 aaPredicted RBP19.53■□□□□ 0.72
TPM1-208ENST00000404484 FOLH1BQ9HBA9 442 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 POLE3Q9NRF9 147 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 MKL2Q9ULH7 1088 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 ABCG2Q9UNQ0 655 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 ERVK-19Q9WJR5 959 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 CFL2Q9Y281 166 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 RAXQ9Y2V3 346 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 CLCA3PQ9Y6N3 262 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 ZFHX4Q86UP3 3567 aa19.53■□□□□ 0.72
TPM1-208ENST00000404484 OR2W5A6NFC9 320 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 G3V2T6 193 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 SOCS2O14508 198 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 ADAMDEC1O15204 470 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 ACOX3O15254 700 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 TLX3O43711 291 aaPredicted RBP19.52■□□□□ 0.71
TPM1-208ENST00000404484 FESP07332 822 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 CYC1P08574 325 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 POU6F2P78424 691 aaPredicted RBP19.52■□□□□ 0.71
TPM1-208ENST00000404484 EIF3IQ13347 325 aaKnown RBP19.52■□□□□ 0.71
TPM1-208ENST00000404484 NSDHLQ15738 373 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 DUSP7Q16829 419 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 OVCH1Q7RTY7 1134 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 WDR53Q7Z5U6 358 aaPredicted RBP19.52■□□□□ 0.71
TPM1-208ENST00000404484 TMEM151BQ8IW70 566 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 SLC38A9Q8NBW4 561 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 OR14A16Q8NHC5 309 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 TSLPQ969D9 159 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 NAF1Q96HR8 494 aaKnown RBP19.52■□□□□ 0.71
TPM1-208ENST00000404484 ZNF597Q96LX8 424 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 PINK1Q9BXM7 581 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 VN1R1Q9GZP7 353 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 REEP1Q9H902 201 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 APMAPQ9HDC9 416 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 ASCL3Q9NQ33 180 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 PNO1Q9NRX1 252 aaKnown RBP19.52■□□□□ 0.71
TPM1-208ENST00000404484 SLC22A11Q9NSA0 550 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 IFT80Q9P2H3 777 aaPredicted RBP19.52■□□□□ 0.71
TPM1-208ENST00000404484 CTSFQ9UBX1 484 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 RAB26Q9ULW5 256 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 IFT52Q9Y366 437 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 FAM32AQ9Y421 112 aaKnown RBP19.52■□□□□ 0.71
TPM1-208ENST00000404484 WDR45Q9Y484 360 aa19.52■□□□□ 0.71
TPM1-208ENST00000404484 PKD1L2Q7Z442 2459 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 DSPP15924 2871 aaKnown RBP19.51■□□□□ 0.71
TPM1-208ENST00000404484 STX11O75558 287 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 TNFSF15O95150 251 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 ALBP02768 609 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 GUSBP08236 651 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 ZGLP1P0C6A0 271 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 SSTR4P31391 388 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 GABRA3P34903 492 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 EMDP50402 254 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 RAB15P59190 212 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 CHRNEQ04844 493 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 NRF1Q16656 503 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 TBC1D25Q3MII6 688 aa19.51■□□□□ 0.71
TPM1-208ENST00000404484 DCST2Q5T1A1 773 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms