RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 TOR1AIP2Q8NFQ8 470 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 OR2L8Q8NGY9 312 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 OR52N1Q8NH53 320 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 ACOT11Q8WXI4 607 aaPredicted RBP10.07□□□□□ -0.8
CLIP4-204ENST00000404424 SMG7Q92540 1137 aaKnown RBP10.07□□□□□ -0.8
CLIP4-204ENST00000404424 OTUB1Q96FW1 271 aaPredicted RBP10.07□□□□□ -0.8
CLIP4-204ENST00000404424 FAM46AQ96IP4 442 aaKnown RBP10.07□□□□□ -0.8
CLIP4-204ENST00000404424 DMRTB1Q96MA1 342 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 INSM2Q96T92 566 aaPredicted RBP10.07□□□□□ -0.8
CLIP4-204ENST00000404424 SARGQ9BW04 601 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 JAM3Q9BX67 310 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 TEX101Q9BY14 249 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 MRPS30Q9NP92 439 aaKnown RBP10.07□□□□□ -0.8
CLIP4-204ENST00000404424 PRDM7Q9NQW5 492 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 SEMA4GQ9NTN9 838 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 RBFOX1Q9NWB1 397 aaKnown RBP10.07□□□□□ -0.8
CLIP4-204ENST00000404424 COMMD3Q9UBI1 195 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 NUFIP1Q9UHK0 495 aaKnown RBP10.07□□□□□ -0.8
CLIP4-204ENST00000404424 ADAM30Q9UKF2 790 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 CES1P1Q9UKY3 287 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 NDRG2Q9UN36 371 aaKnown RBP10.07□□□□□ -0.8
CLIP4-204ENST00000404424 ATG4BQ9Y4P1 393 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 MUC22E2RYF6 1773 aaPredicted RBP10.07□□□□□ -0.8
CLIP4-204ENST00000404424 IGLON5A6NGN9 336 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 WASHC1A8K0Z3 465 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 SURF4O15260 269 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 PRKRAO75569 313 aaKnown RBP10.07□□□□□ -0.8
CLIP4-204ENST00000404424 IGHA1P01876 353 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 POU2F2P09086 479 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 PRKAR1AP10644 381 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 ACP5P13686 325 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 F3P13726 295 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 TEAD1P28347 426 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 PKLRP30613 574 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 EVX1P49640 407 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 MLF2Q15773 248 aaPredicted RBP10.07□□□□□ -0.8
CLIP4-204ENST00000404424 PIP5KL1Q5T9C9 394 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 TIGD3Q6B0B8 471 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 TMEM107Q6UX40 140 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 WASH2PQ6VEQ5 465 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 OR2L5Q8NG80 312 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 OR8K5Q8NH50 307 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 C16orf58Q96GQ5 468 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 RNF170Q96K19 258 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 RIPOR3Q96MK2 946 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 ATF6BQ99941 703 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 TMEM246Q9BRR3 403 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 CNIH4Q9P003 139 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 KLHL21Q9UJP4 597 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 KCNE3Q9Y6H6 103 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 HEATR5BQ9P2D3 2071 aa10.07□□□□□ -0.8
CLIP4-204ENST00000404424 CKAP5Q14008 2032 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 MYO10Q9HD67 2058 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 PTPRSQ13332 1948 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 DUXAA6NLW8 204 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 CPSF4LA6NMK7 179 aaKnown RBP10.06□□□□□ -0.8
CLIP4-204ENST00000404424 A8MV72 311 aaPredicted RBP10.06□□□□□ -0.8
CLIP4-204ENST00000404424 AIFM1O95831 613 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 HMGN1P05114 100 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 APEX1P27695 318 aaKnown RBP10.06□□□□□ -0.8
CLIP4-204ENST00000404424 HTR1FP30939 366 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 BDH1Q02338 343 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 CHRNEQ04844 493 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 AGERQ15109 404 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 GAB4Q2WGN9 574 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 CNIH2Q6PI25 160 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 HMGN2P46Q86SG4 172 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 LHFPL3Q86UP9 236 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 LIX1LQ8IVB5 337 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 TCTE3Q8IZS6 198 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 GRPEL2Q8TAA5 225 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 NEIL3Q8TAT5 605 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 DNAJA4Q8WW22 397 aaPredicted RBP10.06□□□□□ -0.8
CLIP4-204ENST00000404424 RSPRY1Q96DX4 576 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 ELP4Q96EB1 424 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 TTYH2Q9BSA4 534 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 CRISPLD2Q9H0B8 497 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 QRSL1Q9H0R6 528 aaKnown RBP10.06□□□□□ -0.8
CLIP4-204ENST00000404424 RANGRFQ9HD47 186 aaPredicted RBP10.06□□□□□ -0.8
CLIP4-204ENST00000404424 PAQR5Q9NXK6 330 aaPredicted RBP10.06□□□□□ -0.8
CLIP4-204ENST00000404424 NLGN3Q9NZ94 848 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 H2AFY2Q9P0M6 372 aaPredicted RBP10.06□□□□□ -0.8
CLIP4-204ENST00000404424 PHF11Q9UIL8 331 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 ANKRD34BA5PLL1 514 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 GABRPO00591 440 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 SLC19A2O60779 497 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 OR5F1O95221 314 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 CSF2P04141 144 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 TRIM23P36406 574 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 MLLT1Q03111 559 aaPredicted RBP10.06□□□□□ -0.8
CLIP4-204ENST00000404424 DUSP2Q05923 314 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 MAP4K2Q12851 820 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 ZNF155Q12901 538 aaPredicted RBP10.06□□□□□ -0.8
CLIP4-204ENST00000404424 PGGHGQ32M88 737 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 CLEC12AQ5QGZ9 265 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 VRK2Q86Y07 508 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 MARCH9Q86YJ5 346 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 SPPL3Q8TCT6 385 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 ACOT12Q8WYK0 555 aa10.06□□□□□ -0.8
CLIP4-204ENST00000404424 TRIM43Q96BQ3 446 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms