RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 BCLAF3A2AJT9 711 aaKnown RBP3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 FAM74A7A6NL05 159 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 ZNF487B1APH4 448 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 EFNA2O43921 213 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 NUDT14O95848 222 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 PCCBP05166 539 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 HOXB7P09629 217 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 ALPIP09923 528 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 ANXA3P12429 323 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 PGFP49763 221 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 RAB35Q15286 201 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 LTB4RQ15722 352 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 ZIC1Q15915 447 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 LPAL2Q16609 132 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 MAPK6Q16659 721 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 SLC22A6Q4U2R8 563 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 FAM74A3Q4VXF1 159 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 RIPPLY2Q5TAB7 128 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 ZNF772Q68DY9 489 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 LEG1Q6P5S2 330 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 BTNL3Q6UXE8 466 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 CYS1Q717R9 158 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 UNC5CLQ8IV45 518 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 SLC22A18ASQ8N1D0 253 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 ZNF485Q8NCK3 441 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 ZNF540Q8NDQ6 660 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 TBCKQ8TEA7 893 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 RAB7BQ96AH8 199 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 C18orf25Q96B23 403 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 TADA1Q96BN2 335 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 UPRTQ96BW1 309 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 C11orf24Q96F05 449 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 MCCC1Q96RQ3 725 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 FICDQ9BVA6 458 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 TBC1D10AQ9BXI6 508 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 MRPL13Q9BYD1 178 aaKnown RBP3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 PANK3Q9H999 370 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 MEPEQ9NQ76 525 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 KLRF1Q9NZS2 232 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 B9D1Q9UPM9 204 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 MRPL11Q9Y3B7 192 aaKnown RBP3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 PCNX3Q9H6A9 2034 aa3.07□□□□□ -1.92
HMGB1P17-201ENST00000403495 NPIPA5A0A0B4J1W7 369 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 FBLL1A6NHQ2 334 aaKnown RBP3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 NPIPA5E9PKD4 350 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 C11orf98E9PRG8 122 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 H3BTX0 84 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 PDLIM1O00151 329 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 CLDN3O15551 220 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 TYROBPO43914 113 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 NOL3O60936 208 aaKnown RBP3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 NEBLO76041 1014 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 SERPINB2P05120 415 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 METP08581 1390 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 IGFBP1P08833 259 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 RNF224P0DH78 156 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 FOLR2P14207 255 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 ACADSP16219 412 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 XRCC1P18887 633 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 DRD5P21918 477 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 PTBP1P26599 531 aaKnown RBP eCLIP3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 DPP4P27487 766 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 MAGEA5P43359 124 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 HMGCS2P54868 508 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 RPS6P62753 249 aaKnown RBP3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 CNTN2Q02246 1040 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 TMEM41BQ5BJD5 291 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 FAAP20Q6NZ36 180 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 NIPAL3Q6P499 406 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 HIPK1Q86Z02 1210 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 CBWD2Q8IUF1 395 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 LRRC49Q8IUZ0 686 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 HSCBQ8IWL3 235 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 PHC2Q8IXK0 858 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 CENPLQ8N0S6 344 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 SPEM1Q8N4L4 309 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 OR2T34Q8NGX1 318 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 SNED1Q8TER0 1413 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 RASL10AQ92737 203 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 RBM18Q96H35 190 aaKnown RBP3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 RANBP9Q96S59 729 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 TMEM121Q9BTD3 319 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 PUS3Q9BZE2 481 aaKnown RBP3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 DHX33Q9H6R0 707 aaKnown RBP3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 WDR76Q9H967 626 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 MEAF6Q9HAF1 191 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 PRSS21Q9Y6M0 314 aa3.06□□□□□ -1.92
HMGB1P17-201ENST00000403495 TDRD15B5MCY1 1934 aaKnown RBP3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 CUX2O14529 1486 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 ZSCAN5BA6NJL1 495 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 PPIHO43447 177 aaKnown RBP3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 CGAP01215 116 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 JCHAINP01591 159 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 KRT6BP04259 564 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 ASNSP08243 561 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 THRBP10828 461 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 CLUP10909 449 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 PVRP15151 417 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 TNNI3P19429 210 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 BCL3P20749 454 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms