RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 GPX2P18283 190 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 PIGAP37287 484 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 CRATP43155 626 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 TUBA3CQ13748 450 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 RABL3Q5HYI8 236 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 CCNJQ5T5M9 372 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 C8orf82Q6P1X6 216 aaPredicted RBP14.69□□□□□ -0.06
HMGA1-204ENST00000401473 TUBA3EQ6PEY2 450 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 C6orf89Q6UWU4 347 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 MDGA2Q7Z553 956 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 TMEM156Q8N614 296 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 SLC15A4Q8N697 577 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 BCORP1Q8N888 145 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 OR52N2Q8NGI0 321 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 NSL1Q96IY1 281 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 SIGLEC12Q96PQ1 595 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 STACQ99469 402 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 CPPED1Q9BRF8 314 aaPredicted RBP14.69□□□□□ -0.06
HMGA1-204ENST00000401473 GPATCH1Q9BRR8 931 aaKnown RBP14.69□□□□□ -0.06
HMGA1-204ENST00000401473 ZNF71Q9NQZ8 489 aaPredicted RBP14.69□□□□□ -0.06
HMGA1-204ENST00000401473 CBLCQ9ULV8 474 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 TP53TG5Q9Y2B4 290 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 OR10H1Q9Y4A9 318 aa14.69□□□□□ -0.06
HMGA1-204ENST00000401473 CCT8L1PA6NM43 557 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 A8MVJ9 347 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 NEURL1O76050 574 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 KCNK2O95069 426 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 FBXO45P0C2W1 286 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 SLC6A2P23975 617 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 NUDT2P50583 147 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 NRG3P56975 720 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 MRPS22P82650 360 aaKnown RBP14.68□□□□□ -0.06
HMGA1-204ENST00000401473 CYP27C1Q4G0S4 372 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 IGFL3Q6UXB1 125 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 OLIG3Q7RTU3 272 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 TAGAPQ8N103 731 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 OR5M3Q8NGP4 307 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 FAM110BQ8TC76 370 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 ASB15Q8WXK1 588 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 EFHD2Q96C19 240 aaPredicted RBP14.68□□□□□ -0.06
HMGA1-204ENST00000401473 OMA1Q96E52 524 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 RMND5BQ96G75 393 aaPredicted RBP14.68□□□□□ -0.06
HMGA1-204ENST00000401473 BBC3Q96PG8 261 aaPredicted RBP14.68□□□□□ -0.06
HMGA1-204ENST00000401473 TRIM45Q9H8W5 580 aaPredicted RBP14.68□□□□□ -0.06
HMGA1-204ENST00000401473 Q9N2J8 555 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 GID8Q9NWU2 228 aa14.68□□□□□ -0.06
HMGA1-204ENST00000401473 DUXAA6NLW8 204 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 TSPAN2O60636 221 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 UBOX5O94941 541 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 CYB561P49447 251 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 HLCSP50747 726 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 FBXW4P57775 412 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 FUT5Q11128 374 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 ART3Q13508 389 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 MAPK11Q15759 364 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 FIGNL1Q6PIW4 674 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 ZAR1Q86SH2 424 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 SLC22A8Q8TCC7 542 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 ROPN1LQ96C74 230 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 SPACA9Q96E40 222 aaPredicted RBP14.67□□□□□ -0.06
HMGA1-204ENST00000401473 ADOQ96SZ5 270 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 THUMPD3Q9BV44 507 aaKnown RBP14.67□□□□□ -0.06
HMGA1-204ENST00000401473 KAT8Q9H7Z6 458 aaKnown RBP14.67□□□□□ -0.06
HMGA1-204ENST00000401473 LRFN1Q9P244 771 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 TUBD1Q9UJT1 453 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 RALYQ9UKM9 306 aaKnown RBP14.67□□□□□ -0.06
HMGA1-204ENST00000401473 TTC36A6NLP5 189 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 ASNA1O43681 348 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 FCMRO60667 390 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 UGT2B11O75310 529 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 TNFRSF21O75509 655 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 REM1O75628 298 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 ESRRAP11474 423 aaPredicted RBP14.67□□□□□ -0.06
HMGA1-204ENST00000401473 RFX3P48380 749 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 OC90Q02509 493 aaPredicted RBP14.67□□□□□ -0.06
HMGA1-204ENST00000401473 PLCXD2Q0VAA5 305 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 ADRM1Q16186 407 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 NTRK2Q16620 822 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 HEPHL1Q6MZM0 1159 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 OPN5Q6U736 354 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 SLC34A3Q8N130 599 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 COX18Q8N8Q8 333 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 OR10G3Q8NGC4 313 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 DIO2Q92813 273 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 MAL2Q969L2 176 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 SDF2Q99470 211 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 UTP23Q9BRU9 249 aaKnown RBP14.67□□□□□ -0.06
HMGA1-204ENST00000401473 BTBD2Q9BX70 525 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 RNF32Q9H0A6 362 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 ADNPQ9H2P0 1102 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 HPF1Q9NWY4 346 aa14.67□□□□□ -0.06
HMGA1-204ENST00000401473 RP1L1Q8IWN7 2480 aaPredicted RBP14.66□□□□□ -0.06
HMGA1-204ENST00000401473 SVILO95425 2214 aa14.66□□□□□ -0.06
HMGA1-204ENST00000401473 OR5H15A6NDH6 313 aa14.66□□□□□ -0.06
HMGA1-204ENST00000401473 EVPLLA8MZ36 301 aa14.66□□□□□ -0.06
HMGA1-204ENST00000401473 PPM1BO75688 479 aa14.66□□□□□ -0.06
HMGA1-204ENST00000401473 ZIC2O95409 532 aaPredicted RBP14.66□□□□□ -0.06
HMGA1-204ENST00000401473 KRT16P08779 473 aa14.66□□□□□ -0.06
HMGA1-204ENST00000401473 BMP2P12643 396 aa14.66□□□□□ -0.06
HMGA1-204ENST00000401473 NAGAP17050 411 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms