RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 AHCTF1Q8WYP5 2266 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 OR14I1A6ND48 311 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 AGRPO00253 132 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 SNPHO15079 494 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 AKAP10O43572 662 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 HS6ST1O60243 411 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 FZD7O75084 574 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 OR2J2O76002 312 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 HOXD4P09016 255 aaPredicted RBP6.92□□□□□ -1.3
USP16-204ENST00000399976 EDN3P14138 238 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 ETS2P15036 469 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 HOXB6P17509 224 aaKnown RBP6.92□□□□□ -1.3
USP16-204ENST00000399976 FKBP2P26885 142 aaKnown RBP6.92□□□□□ -1.3
USP16-204ENST00000399976 ARG2P78540 354 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 ZNF155Q12901 538 aaPredicted RBP6.92□□□□□ -1.3
USP16-204ENST00000399976 CYLC2Q14093 348 aaPredicted RBP6.92□□□□□ -1.3
USP16-204ENST00000399976 ZNF766Q5HY98 468 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 FNDC7Q5VTL7 733 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 CPLX4Q7Z7G2 160 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 ZNF440Q8IYI8 595 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 CYP4Z2PQ8N1L4 340 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 KIF2BQ8N4N8 673 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 ZNF321PQ8N8H1 164 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 PSD4Q8NDX1 1056 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 OR52E4Q8NGH9 312 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 OMA1Q96E52 524 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 PANX1Q96RD7 426 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 SLX1AQ9BQ83 275 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 CPPED1Q9BRF8 314 aaPredicted RBP6.92□□□□□ -1.3
USP16-204ENST00000399976 GPATCH1Q9BRR8 931 aaKnown RBP6.92□□□□□ -1.3
USP16-204ENST00000399976 SLC35A5Q9BS91 424 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 POLR2J2Q9GZM3 115 aaKnown RBP6.92□□□□□ -1.3
USP16-204ENST00000399976 FAM107BQ9H098 131 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 POLR2J3Q9H1A7 115 aaKnown RBP6.92□□□□□ -1.3
USP16-204ENST00000399976 LRFN1Q9P244 771 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 BCAP29Q9UHQ4 241 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 BOKQ9UMX3 212 aaPredicted RBP6.92□□□□□ -1.3
USP16-204ENST00000399976 CEP295Q9C0D2 2601 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 HRKO00198 91 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 ANGPT2O15123 496 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 EIF4E2O60573 245 aaKnown RBP6.92□□□□□ -1.3
USP16-204ENST00000399976 TNFRSF21O75509 655 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 SLC25A12O75746 678 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 LRATO95237 230 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 HMGN2P05204 90 aaKnown RBP6.92□□□□□ -1.3
USP16-204ENST00000399976 HPNP05981 417 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 ZNF17P17021 662 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 CAPN3P20807 821 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 KRT20P35900 424 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 SOX3P41225 446 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 MAP2K6P52564 334 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 ID2Q02363 134 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 PLCXD2Q0VAA5 305 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 HSPB3Q12988 150 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 ZNF630Q2M218 657 aaPredicted RBP6.92□□□□□ -1.3
USP16-204ENST00000399976 PGS1Q32NB8 556 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 SOWAHCQ53LP3 525 aaPredicted RBP6.92□□□□□ -1.3
USP16-204ENST00000399976 SLC25A53Q5H9E4 307 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 ATAD3BQ5T9A4 648 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 RNF220Q5VTB9 566 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 FAM69BQ5VUD6 431 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 TMEM198Q66K66 360 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 PAOXQ6QHF9 649 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 Q6ZPB1 254 aaPredicted RBP6.92□□□□□ -1.3
USP16-204ENST00000399976 CALHM3Q86XJ0 350 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 SIAH3Q8IW03 269 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 EID3Q8N140 333 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 BCORP1Q8N888 145 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 Q8NA96 180 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 CLHC1Q8NHS4 586 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 BBS10Q8TAM1 723 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 SLC39A7Q92504 469 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 OR7D2Q96RA2 312 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 CCT8L2Q96SF2 557 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 OR2B2Q9GZK3 357 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 C1orf21Q9H246 121 aa6.92□□□□□ -1.3
USP16-204ENST00000399976 A0A0G2JPF8 293 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 A0A1W2PS29 197 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 ERICH4A6NGS2 130 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 HNRNPCL2B2RXH8 293 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 HNRNPCL3B7ZW38 293 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 B8ZZF3 427 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 KCNK2O95069 426 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 PDGFAP04085 211 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 P04436 131 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 CELA2AP08217 269 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 HNRNPCL4P0DMR1 293 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 MATN1P21941 496 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 PTGDSP41222 190 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 PCYT1AP49585 367 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 CORO7P57737 925 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 GAB1Q13480 694 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 VEZF1Q14119 521 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 ZNF750Q32MQ0 723 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 AGKQ53H12 422 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 C19orf48Q6RUI8 117 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 GALNT11Q8NCW6 608 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 ST6GALNAC3Q8NDV1 305 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 ZNF597Q96LX8 424 aa6.91□□□□□ -1.3
USP16-204ENST00000399976 RNF145Q96MT1 663 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms