RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 TTC36A6NLP5 189 aa13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 PIP5K1BO14986 540 aa13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 TOXO94900 526 aa13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 TUBBP07437 444 aa13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 SNRPB2P08579 225 aaKnown RBP13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 CREB1P16220 341 aa13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 FRKP42685 505 aaPredicted RBP13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 ZNF844Q08AG5 666 aa13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 SF3B4Q15427 424 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 XKR7Q5GH72 579 aa13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 PLCZ1Q86YW0 608 aa13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 WDSUB1Q8N9V3 476 aa13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 FAM83FQ8NEG4 500 aaPredicted RBP13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 OR10Q1Q8NGQ4 319 aa13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 ZFP28Q8NHY6 868 aa13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 PPCDCQ96CD2 204 aa13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 PPP3R2Q96LZ3 170 aa13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 TSSK3Q96PN8 268 aa13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 LMF2Q9BU23 707 aaKnown RBP13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 SSU72Q9NP77 194 aaKnown RBP13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 ALKBH4Q9NXW9 302 aa13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 OTOGQ6ZRI0 2925 aa13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 CSMD1Q96PZ7 3565 aa13.56□□□□□ -0.24
SMIM11A-203ENST00000399299 A0A0G2JNJ9 132 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 FAM90A27PA6NNH2 459 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 ESPNB1AK53 854 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 TMEM114B3SHH9 223 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 RGS16O15492 202 aaPredicted RBP13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 CTIFO43310 598 aaKnown RBP13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 ACTL6AO96019 429 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 BCKDHAP12694 445 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 DDX5P17844 614 aaKnown RBP13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 MSX1P28360 303 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 MAPK1P28482 360 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 SSTR2P30874 369 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 ARRB2P32121 409 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 GCKP35557 465 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 ADH7P40394 386 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 TOMM20Q15388 145 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 ZNHIT3Q15649 155 aaPredicted RBP13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 GALNTL6Q49A17 601 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 ACSF3Q4G176 576 aaPredicted RBP13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 EIPR1Q53HC9 387 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 ZNF385BQ569K4 471 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 WIPI1Q5MNZ9 446 aaPredicted RBP13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 MEX3BQ6ZN04 569 aaKnown RBP13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 ZNF551Q7Z340 670 aaPredicted RBP13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 R3HCC1LQ7Z5L2 792 aaKnown RBP13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 LACC1Q8IV20 430 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 ZNF295-AS1Q8N0V1 137 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 OR4N2Q8NGD1 307 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 HOXB13Q92826 284 aaPredicted RBP13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 ABTB1Q969K4 478 aaPredicted RBP13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 GFM2Q969S9 779 aaKnown RBP13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 C14orf79Q96F83 325 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 ZBED6CLQ96FA7 236 aaPredicted RBP13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 UGT2B28Q9BY64 529 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 OR2B2Q9GZK3 357 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 Q9N2J8 555 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 SERHLQ9NQF3 203 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 ACSS1Q9NUB1 689 aaPredicted RBP13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 NTMQ9P121 344 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 Q9UFV3 132 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 ABCG2Q9UNQ0 655 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 MAPRE3Q9UPY8 281 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 SLC6A5Q9Y345 797 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 MRPS18CQ9Y3D5 142 aaKnown RBP13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 ANKHD1Q8IWZ3 2542 aaKnown RBP13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 POLQO75417 2590 aa13.55□□□□□ -0.24
SMIM11A-203ENST00000399299 NKX2-6A6NCS4 301 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 C2orf72A6NCS6 295 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 EPPINO95925 133 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 CYP4B1P13584 511 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 BMP7P18075 431 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 SRD5A2P31213 254 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 RPL3P39023 403 aaKnown RBP13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 SERPINB4P48594 390 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 GAS1P54826 345 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 PSMD4P55036 377 aaKnown RBP13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 HSPB3Q12988 150 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 DECR1Q16698 335 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 SLC25A35Q3KQZ1 300 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 LRIG3Q6UXM1 1119 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 CROCCP2Q86T23 111 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 YRDCQ86U90 279 aaKnown RBP13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 NUDCD3Q8IVD9 361 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 AGR3Q8TD06 166 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 EFHD2Q96C19 240 aaPredicted RBP13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 UCK2Q9BZX2 261 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 C3orf14Q9HBI5 128 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 NPDC1Q9NQX5 325 aaPredicted RBP13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 SH3BP4Q9P0V3 963 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 BAIAP2L1Q9UHR4 511 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 ZDHHC2Q9UIJ5 367 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 MRTO4Q9UKD2 239 aaKnown RBP13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 CBLCQ9ULV8 474 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 ANKRD17O75179 2603 aaKnown RBP13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 MED12Q93074 2177 aa13.54□□□□□ -0.24
SMIM11A-203ENST00000399299 CD8B2A6NJW9 211 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 HSPB2A8KAH6 182 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms