RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 RAI14Q9P0K7 980 aa2.15□□□□□ -2.07
CD47-203ENST00000398258 ZNF581Q9P0T4 197 aa2.15□□□□□ -2.07
CD47-203ENST00000398258 GHRLQ9UBU3 117 aa2.15□□□□□ -2.07
CD47-203ENST00000398258 ATP6V1HQ9UI12 483 aa2.15□□□□□ -2.07
CD47-203ENST00000398258 RNF24Q9Y225 148 aa2.15□□□□□ -2.07
CD47-203ENST00000398258 SLC9A8Q9Y2E8 581 aa2.15□□□□□ -2.07
CD47-203ENST00000398258 MOB4Q9Y3A3 225 aa2.15□□□□□ -2.07
CD47-203ENST00000398258 EXOSC1Q9Y3B2 195 aaKnown RBP2.15□□□□□ -2.07
CD47-203ENST00000398258 FKBP7Q9Y680 259 aa2.15□□□□□ -2.07
CD47-203ENST00000398258 CARMIL1Q5VZK9 1371 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 IGKV6D-41A0A0C4DH26 115 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 A0A0J9YVX5 310 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 TRBV7-9A0A0J9YWB2 115 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 MFSD2BA6NFX1 497 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 ACOD1A6NK06 481 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 LRRC30A6NM36 301 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 WASHC1A8K0Z3 465 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 FAM220BPB1ANY3 271 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 SHISA9B4DS77 424 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 H3BMH7 237 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 PEX11AO75192 247 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 SCGB2A1O75556 95 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 OR4F21O95013 312 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 MFN2O95140 757 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 OPN1LWP04000 364 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 FOLR2P14207 255 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 UQCRBP14927 111 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 CYP2F1P24903 491 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 SHC1P29353 583 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 PTGFRP43088 359 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 POU3F4P49335 361 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 SLC7A2P52569 658 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 MTTPP55157 894 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 TRA2BP62995 288 aaKnown RBP2.14□□□□□ -2.07
CD47-203ENST00000398258 KLHL30Q0D2K2 578 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 BNIP1Q12981 228 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 EXOSC2Q13868 293 aaKnown RBP2.14□□□□□ -2.07
CD47-203ENST00000398258 CYLC2Q14093 348 aaPredicted RBP2.14□□□□□ -2.07
CD47-203ENST00000398258 TFDP1Q14186 410 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 RFTN1Q14699 578 aaPredicted RBP2.14□□□□□ -2.07
CD47-203ENST00000398258 C14orf28Q4W4Y0 310 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 ACER2Q5QJU3 275 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 DCST2Q5T1A1 773 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 SEL1L2Q5TEA6 688 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 FAM219BQ5XKK7 198 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 APOOLQ6UXV4 268 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 LPCAT2Q7L5N7 544 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 TIPARPQ7Z3E1 657 aaKnown RBP2.14□□□□□ -2.07
CD47-203ENST00000398258 CEACAM19Q7Z692 300 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 EFCAB13Q8IY85 973 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 POM121L12Q8N7R1 296 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 SUMF1Q8NBK3 374 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 ITLN1Q8WWA0 313 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 VPS35Q96QK1 796 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 SLC30A2Q9BRI3 323 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 PYGO2Q9BRQ0 406 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 THUMPD2Q9BTF0 503 aaKnown RBP2.14□□□□□ -2.07
CD47-203ENST00000398258 CARD6Q9BX69 1037 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 DPH5Q9H2P9 285 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 RWDD1Q9H446 243 aaPredicted RBP2.14□□□□□ -2.07
CD47-203ENST00000398258 WDR76Q9H967 626 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 GPN2Q9H9Y4 310 aaPredicted RBP2.14□□□□□ -2.07
CD47-203ENST00000398258 POLD4Q9HCU8 107 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 ESM1Q9NQ30 184 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 DCAF13Q9NV06 445 aaKnown RBP2.14□□□□□ -2.07
CD47-203ENST00000398258 FAM120CQ9NX05 1096 aaKnown RBP2.14□□□□□ -2.07
CD47-203ENST00000398258 GDAP2Q9NXN4 497 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 CLEC5AQ9NY25 188 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 TAS2R16Q9NYV7 291 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 SH3BGRL2Q9UJC5 107 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 KIF3AQ9Y496 699 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 CSAG2Q9Y5P2 127 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 AP4B1Q9Y6B7 739 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 AP1M2Q9Y6Q5 423 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 GRIN2DO15399 1336 aa2.14□□□□□ -2.07
CD47-203ENST00000398258 ESYT2A0FGR8 921 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 TRIM49BA6NDI0 452 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 SRRM5B3KS81 715 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 CLDN5O00501 218 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 SDHDO14521 159 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 CTAGE5O15320 804 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 GALR3O60755 368 aaPredicted RBP2.13□□□□□ -2.07
CD47-203ENST00000398258 SDC3O75056 442 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 KBTBD11O94819 623 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 VENTXO95231 258 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 CA3P07451 260 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 ANXA4P09525 319 aaPredicted RBP2.13□□□□□ -2.07
CD47-203ENST00000398258 CALCBP10092 127 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 HSPA5P11021 654 aaKnown RBP2.13□□□□□ -2.07
CD47-203ENST00000398258 BCKDHAP12694 445 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 HSD17B1P14061 328 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 ACADSP16219 412 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 TNNI3P19429 210 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 BCL3P20749 454 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 CYLC1P35663 651 aaPredicted RBP2.13□□□□□ -2.07
CD47-203ENST00000398258 OR1D4P47884 311 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 HTR5AP47898 357 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 TRPC1P48995 793 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 EMDP50402 254 aa2.13□□□□□ -2.07
CD47-203ENST00000398258 ARHGDIAP52565 204 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms