RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 MAELQ96JY0 434 aaKnown RBP17.23■□□□□ 0.35
COLCA2-201ENST00000398035 GIN1Q9NXP7 522 aa17.23■□□□□ 0.35
COLCA2-201ENST00000398035 MARCOQ9UEW3 520 aaPredicted RBP17.23■□□□□ 0.35
COLCA2-201ENST00000398035 PCDHGB3Q9Y5G1 929 aa17.23■□□□□ 0.35
COLCA2-201ENST00000398035 SNX8Q9Y5X2 465 aa17.23■□□□□ 0.35
COLCA2-201ENST00000398035 PRRC2CQ9Y520 2896 aaKnown RBP17.22■□□□□ 0.35
COLCA2-201ENST00000398035 PRSS51A0A1B0GVH4 220 aa17.22■□□□□ 0.35
COLCA2-201ENST00000398035 RNASET2O00584 256 aaKnown RBP17.22■□□□□ 0.35
COLCA2-201ENST00000398035 CCL21O00585 134 aa17.22■□□□□ 0.35
COLCA2-201ENST00000398035 CFLARO15519 480 aa17.22■□□□□ 0.35
COLCA2-201ENST00000398035 CBR3O75828 277 aa17.22■□□□□ 0.35
COLCA2-201ENST00000398035 NKX2-2O95096 273 aa17.22■□□□□ 0.35
COLCA2-201ENST00000398035 KRT16P08779 473 aa17.22■□□□□ 0.35
COLCA2-201ENST00000398035 EPHA3P29320 983 aa17.22■□□□□ 0.35
COLCA2-201ENST00000398035 CLK3P49761 638 aaKnown RBP17.22■□□□□ 0.35
COLCA2-201ENST00000398035 CDK9P50750 372 aaKnown RBP17.22■□□□□ 0.35
COLCA2-201ENST00000398035 TIGD3Q6B0B8 471 aa17.22■□□□□ 0.35
COLCA2-201ENST00000398035 SZRD1Q7Z422 152 aa17.22■□□□□ 0.35
COLCA2-201ENST00000398035 FAM57AQ8TBR7 257 aa17.22■□□□□ 0.35
COLCA2-201ENST00000398035 SARAFQ96BY9 339 aa17.22■□□□□ 0.35
COLCA2-201ENST00000398035 FAM120BQ96EK7 910 aaKnown RBP17.22■□□□□ 0.35
COLCA2-201ENST00000398035 PSMG3-AS1Q96PY0 264 aa17.22■□□□□ 0.35
COLCA2-201ENST00000398035 NODALQ96S42 347 aa17.22■□□□□ 0.35
COLCA2-201ENST00000398035 OSBPL11Q9BXB4 747 aa17.22■□□□□ 0.35
COLCA2-201ENST00000398035 ZNF703Q9H7S9 590 aaPredicted RBP17.22■□□□□ 0.35
COLCA2-201ENST00000398035 SDHAF3Q9NRP4 125 aa17.22■□□□□ 0.35
COLCA2-201ENST00000398035 ZCCHC3Q9NUD5 404 aaKnown RBP17.22■□□□□ 0.35
COLCA2-201ENST00000398035 ESPL1Q14674 2120 aa17.22■□□□□ 0.35
COLCA2-201ENST00000398035 PRAMEF25A6NGN4 478 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 LRRC3CA6NJW4 275 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 AQP7O14520 342 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 BCKDKO14874 412 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 NME6O75414 186 aaPredicted RBP17.21■□□□□ 0.35
COLCA2-201ENST00000398035 IL33O95760 270 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 IDO1P14902 403 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 LCN1P31025 176 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 MAP3K8P41279 467 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 MAN2A2P49641 1150 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 HSF1Q00613 529 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 LRRC74AQ0VAA2 488 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 C3AR1Q16581 482 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 SPDYE7PQ495Y7 208 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 NXNQ6DKJ4 435 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 TRILQ7L0X0 811 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 DOLPP1Q86YN1 238 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 GLB1L3Q8NCI6 653 aaPredicted RBP17.21■□□□□ 0.35
COLCA2-201ENST00000398035 OR4N2Q8NGD1 307 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 SLC9A6Q92581 669 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 WDR55Q9H6Y2 383 aaPredicted RBP17.21■□□□□ 0.35
COLCA2-201ENST00000398035 EQTNQ9NQ60 294 aa17.21■□□□□ 0.35
COLCA2-201ENST00000398035 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 TRGV5A0A0B4J1U4 118 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 E9PLN8 166 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 ANKRD28O15084 1053 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 SASH3O75995 380 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 C6orf47O95873 294 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 ALOX5P09917 674 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 RFPL3SP0C7P2 107 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 GDF1P27539 372 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 TP53BP2Q13625 1128 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 GSTA3Q16772 222 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 BICRALQ6AI39 1079 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 MFSD12Q6NUT3 480 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 RPTNQ6XPR3 784 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 CHERPQ8IWX8 916 aaKnown RBP17.21■□□□□ 0.34
COLCA2-201ENST00000398035 SFXN5Q8TD22 340 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 EFHD2Q96C19 240 aaPredicted RBP17.21■□□□□ 0.34
COLCA2-201ENST00000398035 GIMAP5Q96F15 307 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 GNRHR2Q96P88 292 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 STACQ99469 402 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 ZBTB18Q99592 522 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 VKORC1Q9BQB6 163 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 EXO5Q9H790 373 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 DUSP22Q9NRW4 184 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 SIRT3Q9NTG7 399 aaPredicted RBP17.21■□□□□ 0.34
COLCA2-201ENST00000398035 AIG1Q9NVV5 245 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 FAF1Q9UNN5 650 aaPredicted RBP17.21■□□□□ 0.34
COLCA2-201ENST00000398035 ABCG2Q9UNQ0 655 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 USH1CQ9Y6N9 552 aa17.21■□□□□ 0.34
COLCA2-201ENST00000398035 RELNP78509 3460 aa17.2■□□□□ 0.34
COLCA2-201ENST00000398035 GOLGA8QA0A0J9YX86 632 aa17.2■□□□□ 0.34
COLCA2-201ENST00000398035 GOLGA8OA6NCC3 632 aa17.2■□□□□ 0.34
COLCA2-201ENST00000398035 E9PBE3 544 aa17.2■□□□□ 0.34
COLCA2-201ENST00000398035 GOLGA8NF8WBI6 632 aa17.2■□□□□ 0.34
COLCA2-201ENST00000398035 SNPHO15079 494 aa17.2■□□□□ 0.34
COLCA2-201ENST00000398035 TRAPPC6AO75865 159 aa17.2■□□□□ 0.34
COLCA2-201ENST00000398035 HMGN2P05204 90 aaKnown RBP17.2■□□□□ 0.34
COLCA2-201ENST00000398035 HPNP05981 417 aa17.2■□□□□ 0.34
COLCA2-201ENST00000398035 TPOP07202 933 aa17.2■□□□□ 0.34
COLCA2-201ENST00000398035 HOXD4P09016 255 aaPredicted RBP17.2■□□□□ 0.34
COLCA2-201ENST00000398035 EFNA1P20827 205 aaPredicted RBP17.2■□□□□ 0.34
COLCA2-201ENST00000398035 S100A3P33764 101 aa17.2■□□□□ 0.34
COLCA2-201ENST00000398035 GCKP35557 465 aa17.2■□□□□ 0.34
COLCA2-201ENST00000398035 SMSP52788 366 aa17.2■□□□□ 0.34
COLCA2-201ENST00000398035 GXYLT1Q4G148 440 aa17.2■□□□□ 0.34
COLCA2-201ENST00000398035 FNDC7Q5VTL7 733 aa17.2■□□□□ 0.34
COLCA2-201ENST00000398035 TMEM211Q6ICI0 200 aa17.2■□□□□ 0.34
COLCA2-201ENST00000398035 MAGEB18Q96M61 343 aa17.2■□□□□ 0.34
COLCA2-201ENST00000398035 G6PC3Q9BUM1 346 aa17.2■□□□□ 0.34
COLCA2-201ENST00000398035 ACTRT3Q9BYD9 372 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms