RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 RBCK1Q9BYM8 510 aa10.49□□□□□ -0.73
CSGALNACT1-202ENST00000397998 CUEDC1Q9NWM3 386 aaPredicted RBP10.49□□□□□ -0.73
CSGALNACT1-202ENST00000397998 MBD1Q9UIS9 605 aaPredicted RBP10.49□□□□□ -0.73
CSGALNACT1-202ENST00000397998 MYO9BQ13459 2157 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 KCNE1BA0A087WTH5 132 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 A0A0G2JMP0 313 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 A0A0X1KG70 313 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 GAPDHSO14556 408 aaPredicted RBP10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 SCN2BO60939 215 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 SLCO2B1O94956 709 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 RCBTB2O95199 551 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 NAA10P41227 235 aaPredicted RBP10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 KCNJ5P48544 419 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 TAS2R38P59533 333 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 TEAD2Q15562 447 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 ESCO2Q56NI9 601 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 NLRP8Q86W28 1048 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 PGBD3Q8N328 593 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 KCT2Q8NC54 265 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 OR4M2Q8NGB6 313 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 OR56A3Q8NH54 315 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 PRRC1Q96M27 445 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 ABCG4Q9H172 646 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 OR10A4Q9H209 315 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 PIGUQ9H490 435 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 DNMT3BQ9UBC3 853 aaKnown RBP10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 SMAD9O15198 467 aaKnown RBP10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 LATO43561 262 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 SCO1O75880 301 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 UBXN7O94888 489 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 ZNF3P17036 446 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 ACVR2AP27037 513 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 SHC1P29353 583 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 BMP8BP34820 402 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 PSMA6P60900 246 aaKnown RBP10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 MLIPQ5VWP3 458 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 RTL4Q6ZR62 310 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 BMP8AQ7Z5Y6 402 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 ZER1Q7Z7L7 766 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 CEP76Q8TAP6 659 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 CD99L2Q8TCZ2 262 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 SETD7Q8WTS6 366 aaKnown RBP10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 LINC01599Q8WXQ3 324 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 CLIP3Q96DZ5 547 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 DPH1Q9BZG8 443 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 TEX10Q9NXF1 929 aaPredicted RBP10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 GNG8Q9UK08 70 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 TRAPPC4Q9Y296 219 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 SLC43A1O75387 559 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 PAHP00439 452 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 SERPINA3P01011 423 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 RAB3BP20337 219 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 PRPH2P23942 346 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 SOX18P35713 384 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 CRYBB2P43320 205 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 FABP5Q01469 135 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 TEKQ02763 1124 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 CAMK1Q14012 370 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 EFR3AQ14156 821 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 MINDY4Q4G0A6 757 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 GARNL3Q5VVW2 1013 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 LIPIQ6XZB0 460 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 VRK2Q86Y07 508 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 GID4Q8IVV7 300 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 SLC44A3Q8N4M1 653 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 FBXO15Q8NCQ5 510 aaPredicted RBP10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 FBLIM1Q8WUP2 373 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 COQ10AQ96MF6 247 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 BARHL1Q9BZE3 327 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 MED20Q9H944 212 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 TCF7L1Q9HCS4 588 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 TAS2R10Q9NYW0 307 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 COMMD9Q9P000 198 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 TAAR2Q9P1P5 351 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 MGAT4CQ9UBM8 478 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 FTSJ1Q9UET6 329 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 CDH10Q9Y6N8 788 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 WDR81Q562E7 1941 aa10.48□□□□□ -0.73
CSGALNACT1-202ENST00000397998 FAM25EA8MYX2 175 aa10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 FOXE1O00358 373 aaPredicted RBP10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 TRIM3O75382 744 aaPredicted RBP10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 TIMP2P16035 220 aa10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 CFL1P23528 166 aaKnown RBP10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 FAUP35544 74 aaKnown RBP10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 PRLHRP49683 370 aa10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 DEFA5Q01523 94 aa10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 ZMYND11Q15326 602 aa10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 PYHIN1Q6K0P9 492 aa10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 CREB3L2Q70SY1 520 aa10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 GALNT11Q8NCW6 608 aa10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 RELTQ969Z4 430 aa10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 PDXPQ96GD0 296 aa10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 SPHK2Q9NRA0 654 aa10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 OR10H1Q9Y4A9 318 aa10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 PRKRAO75569 313 aaKnown RBP10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 ANK1P16157 1881 aa10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 ZNF10P21506 573 aaPredicted RBP10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 PPM1AP35813 382 aa10.47□□□□□ -0.73
CSGALNACT1-202ENST00000397998 OOSP2Q86WS3 158 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms