RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 FCRL4Q96PJ5 515 aa12.93□□□□□ -0.34
COL6A2-203ENST00000397763 SECISBP2Q96T21 854 aaKnown RBP12.93□□□□□ -0.34
COL6A2-203ENST00000397763 ATF6BQ99941 703 aa12.93□□□□□ -0.34
COL6A2-203ENST00000397763 POLDIP3Q9BY77 421 aaKnown RBP12.93□□□□□ -0.34
COL6A2-203ENST00000397763 KLHL21Q9UJP4 597 aa12.93□□□□□ -0.34
COL6A2-203ENST00000397763 MGAT4AQ9UM21 535 aa12.93□□□□□ -0.34
COL6A2-203ENST00000397763 POLHQ9Y253 713 aa12.93□□□□□ -0.34
COL6A2-203ENST00000397763 GSTK1Q9Y2Q3 226 aa12.93□□□□□ -0.34
COL6A2-203ENST00000397763 AKAP8O43823 692 aaKnown RBP12.92□□□□□ -0.34
COL6A2-203ENST00000397763 TOXO94900 526 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 HMGN2P05204 90 aaKnown RBP12.92□□□□□ -0.34
COL6A2-203ENST00000397763 ELK1P19419 428 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 NNMTP40261 264 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 OCLNQ16625 522 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 RRM2BQ7LG56 351 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 METTL3Q86U44 580 aaKnown RBP12.92□□□□□ -0.34
COL6A2-203ENST00000397763 GRAMD2AQ8IUY3 354 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 CLDN22Q8N7P3 220 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 BEST4Q8NFU0 473 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 ZNF431Q8TF32 576 aaPredicted RBP12.92□□□□□ -0.34
COL6A2-203ENST00000397763 TFGQ92734 400 aaPredicted RBP12.92□□□□□ -0.34
COL6A2-203ENST00000397763 METTL2AQ96IZ6 378 aaKnown RBP12.92□□□□□ -0.34
COL6A2-203ENST00000397763 DPH7Q9BTV6 452 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 PPP1R3EQ9H7J1 279 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 DDX31Q9H8H2 851 aaKnown RBP12.92□□□□□ -0.34
COL6A2-203ENST00000397763 A4GALTQ9NPC4 353 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 EXTL2Q9UBQ6 330 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 IRAK3Q9Y616 596 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 GON4LQ3T8J9 2241 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 PCP4L1A6NKN8 68 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 GABRPO00591 440 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 PDGFAP04085 211 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 PEPDP12955 493 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 AHRP35869 848 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 TRIM23P36406 574 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 RPL3P39023 403 aaKnown RBP12.92□□□□□ -0.34
COL6A2-203ENST00000397763 OR10A3P58181 314 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 QSOX2Q6ZRP7 698 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 LSMEM1Q8N8F7 131 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 MRGPRX3Q96LB0 322 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 MCOLN1Q9GZU1 580 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 RNF32Q9H0A6 362 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 OSGEPL1Q9H4B0 414 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 SEMA4GQ9NTN9 838 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 REV3LO60673 3130 aa12.92□□□□□ -0.34
COL6A2-203ENST00000397763 A0A0B4J203 849 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 ALDH1A1P00352 501 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 MRPL3P09001 348 aaKnown RBP12.91□□□□□ -0.34
COL6A2-203ENST00000397763 ATXN8OSP0DMR3 200 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 TBXA2RP21731 343 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 HLA-DMAP28067 261 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 TRHRP34981 398 aaPredicted RBP12.91□□□□□ -0.34
COL6A2-203ENST00000397763 SLC1A3P43003 542 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 SSR2P43308 183 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 SMSP52788 366 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 ARHGEF6Q15052 776 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 NDUFAF5Q5TEU4 345 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 SLC27A4Q6P1M0 643 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 CREB3L2Q70SY1 520 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 MORN4Q8NDC4 146 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 OR8K5Q8NH50 307 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 AKAP1Q92667 903 aaKnown RBP eCLIP12.91□□□□□ -0.34
COL6A2-203ENST00000397763 COL26A1Q96A83 441 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 BBS4Q96RK4 519 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 DPCDQ9BVM2 203 aaPredicted RBP12.91□□□□□ -0.34
COL6A2-203ENST00000397763 C6orf106Q9H6K1 298 aaPredicted RBP12.91□□□□□ -0.34
COL6A2-203ENST00000397763 SPHK2Q9NRA0 654 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 SIRT4Q9Y6E7 314 aaPredicted RBP12.91□□□□□ -0.34
COL6A2-203ENST00000397763 PRR23AA6NEV1 266 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 KIAA0355O15063 1070 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 MAGEB4O15481 346 aaPredicted RBP12.91□□□□□ -0.34
COL6A2-203ENST00000397763 LILRB5O75023 590 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 ACP2P11117 423 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 ABATP80404 500 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 FUT5Q11128 374 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 RPA4Q13156 261 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 ELOAQ14241 798 aaKnown RBP12.91□□□□□ -0.34
COL6A2-203ENST00000397763 FAM129CQ86XR2 697 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 KRT78Q8N1N4 520 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 OR4Q3Q8NH05 313 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 LGR4Q9BXB1 951 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 C1QTNF6Q9BXI9 259 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 TMEM245Q9H330 911 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 PTGFRNQ9P2B2 879 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 P2RX2Q9UBL9 471 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 SRRDQ9UH36 339 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 SLC9A8Q9Y2E8 581 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 ALPK2Q86TB3 2170 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 ARID1BQ8NFD5 2236 aaPredicted RBP12.91□□□□□ -0.34
COL6A2-203ENST00000397763 KIAA1671Q9BY89 1806 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 PRODHO43272 600 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 FCMRO60667 390 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 REM1O75628 298 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 TFPIP10646 304 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 ESPNLQ6ZVH7 1005 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 C12orf40Q86WS4 652 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 SHISA5Q8N114 240 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 FBXL6Q8N531 539 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 TMEM163Q8TC26 289 aa12.91□□□□□ -0.34
COL6A2-203ENST00000397763 C19orf43Q9BQ61 176 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms