RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 RASSF5Q8WWW0 418 aa18.08■□□□□ 0.49
PDLIM2-205ENST00000397761 METTL21AQ8WXB1 218 aa18.08■□□□□ 0.49
PDLIM2-205ENST00000397761 C7orf34Q96L11 122 aa18.08■□□□□ 0.49
PDLIM2-205ENST00000397761 CRB3Q9BUF7 120 aa18.08■□□□□ 0.49
PDLIM2-205ENST00000397761 OR8D2Q9GZM6 311 aa18.08■□□□□ 0.49
PDLIM2-205ENST00000397761 POLE3Q9NRF9 147 aa18.08■□□□□ 0.49
PDLIM2-205ENST00000397761 PADI1Q9ULC6 663 aa18.08■□□□□ 0.49
PDLIM2-205ENST00000397761 CFL2Q9Y281 166 aa18.08■□□□□ 0.49
PDLIM2-205ENST00000397761 GPR55Q9Y2T6 319 aaPredicted RBP18.08■□□□□ 0.49
PDLIM2-205ENST00000397761 LOC102723996A0A087X1L8 192 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 PCDH17O14917 1159 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 GABRA3P34903 492 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 POU6F2P78424 691 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 CHRNEQ04844 493 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 C3orf38Q5JPI3 329 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 DCST2Q5T1A1 773 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 OGFRL1Q5TC84 451 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 TYW3Q6IPR3 259 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 NPSR1Q6W5P4 371 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 OR2Y1Q8NGV0 311 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 CENPNQ96H22 339 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 COL21A1Q96P44 957 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 WDR77Q9BQA1 342 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 SPATA5L1Q9BVQ7 753 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 NUDT9Q9BW91 350 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 SEMA4CQ9C0C4 833 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 PRDM4Q9UKN5 801 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 PADI2Q9Y2J8 665 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 SAGE2PA6NJ88 616 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 SLC30A4O14863 429 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 BRINP1O60477 761 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 TPST1O60507 370 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 FCMRO60667 390 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 UMODP07911 640 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 RAB40ALP0C0E4 278 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 TRHRP34981 398 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 PPICP45877 212 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 ID4P47928 161 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 KCNJ5P48544 419 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 TARDBPQ13148 414 aaKnown RBP eCLIP18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 DUSP7Q16829 419 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 IFI44LQ53G44 452 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 FAAH2Q6GMR7 532 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 FKBP9P1Q75LS8 142 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 OLIG3Q7RTU3 272 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 GPR32P1Q8NGA4 272 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 PIK3R3Q92569 461 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 TPD52L3Q96J77 140 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 ITPAQ9BY32 194 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 MTHFD2LQ9H903 347 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 FOXJ2Q9P0K8 574 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 BAG5Q9UL15 447 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 SPTBN2O15020 2390 aa18.07■□□□□ 0.48
PDLIM2-205ENST00000397761 A0A1W2PQ72 361 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 GXYLT2A0PJZ3 443 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 PRAMEF25A6NGN4 478 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 OR6C76A6NM76 312 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 CLOCKO15516 846 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 PEX1O43933 1283 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 DPM1O60762 260 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 DEAF1O75398 565 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 STX11O75558 287 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 KCNK2O95069 426 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 MT-ND1P03886 318 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 CCNYL3P0C7X3 344 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 RPS4Y1P22090 263 aaKnown RBP18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 VHLP40337 213 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 HPCAP84074 193 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 VLDLRP98155 873 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 CPEB2Q7Z5Q1 589 aaKnown RBP18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 TSEN54Q7Z6J9 526 aaKnown RBP18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 ZDHHC21Q8IVQ6 265 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 ADIPOR1Q96A54 375 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 FAM117AQ9C073 453 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 THSD1Q9NS62 852 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 COPS7AQ9UBW8 275 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 SEC14L3Q9UDX4 400 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 C19orf25Q9UFG5 118 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 WDR45Q9Y484 360 aa18.06■□□□□ 0.48
PDLIM2-205ENST00000397761 KIAA0513O60268 411 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 LDLRP01130 860 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 FABP3P05413 133 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 FESP07332 822 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 DRD5P21918 477 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 PEX2P28328 305 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 PIGAP37287 484 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 DCAF7P61962 342 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 EBPQ15125 230 aaKnown RBP18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 TRIP10Q15642 601 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 AMIGO2Q86SJ2 522 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 SMYD1Q8NB12 490 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 C17orf47Q8NEP4 570 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 B3GNT7Q8NFL0 401 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 GEMIN6Q8WXD5 167 aaKnown RBP18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 ADAMTS14Q8WXS8 1223 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 ZG16BQ96DA0 208 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 MESP1Q9BRJ9 268 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 NTN4Q9HB63 628 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 Q9N2J8 555 aa18.05■□□□□ 0.48
PDLIM2-205ENST00000397761 DNAJB9Q9UBS3 223 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 200.4 ms