RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CYP27C1Q4G0S4 372 aa21.79■■□□□ 1.08
TSPAN4-203ENST00000397397 GCNT6Q5T4J0 391 aa21.79■■□□□ 1.08
TSPAN4-203ENST00000397397 C16orf62Q7Z3J2 963 aa21.79■■□□□ 1.08
TSPAN4-203ENST00000397397 SLC15A4Q8N697 577 aa21.79■■□□□ 1.08
TSPAN4-203ENST00000397397 OR10A6Q8NH74 314 aa21.79■■□□□ 1.08
TSPAN4-203ENST00000397397 TMBIM1Q969X1 311 aa21.79■■□□□ 1.08
TSPAN4-203ENST00000397397 LMF1Q96S06 567 aa21.79■■□□□ 1.08
TSPAN4-203ENST00000397397 PIF1Q9H611 641 aa21.79■■□□□ 1.08
TSPAN4-203ENST00000397397 ZNF552Q9H707 407 aaPredicted RBP21.79■■□□□ 1.08
TSPAN4-203ENST00000397397 THUMPD1Q9NXG2 353 aaKnown RBP21.79■■□□□ 1.08
TSPAN4-203ENST00000397397 TAS2R1Q9NYW7 299 aa21.79■■□□□ 1.08
TSPAN4-203ENST00000397397 ADA2Q9NZK5 511 aa21.79■■□□□ 1.08
TSPAN4-203ENST00000397397 ABI3Q9P2A4 366 aa21.79■■□□□ 1.08
TSPAN4-203ENST00000397397 AP3M1Q9Y2T2 418 aa21.79■■□□□ 1.08
TSPAN4-203ENST00000397397 NPFFR2Q9Y5X5 522 aa21.79■■□□□ 1.08
TSPAN4-203ENST00000397397 HNRNPCL1O60812 293 aaKnown RBP21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 TNFRSF21O75509 655 aa21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 NUDT7P0C024 238 aa21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 PIGAP37287 484 aa21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 MRPS22P82650 360 aaKnown RBP21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 PLCXD2Q0VAA5 305 aa21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 DECR1Q16698 335 aa21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 CYP51A1Q16850 503 aa21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 ISLR2Q6UXK2 745 aa21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 LINC00696Q6ZRV3 163 aa21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 BEST3Q8N1M1 668 aa21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 BCORP1Q8N888 145 aa21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 ASB15Q8WXK1 588 aa21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 EXTL1Q92935 676 aa21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 OMA1Q96E52 524 aa21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 C1orf21Q9H246 121 aa21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 SPAG4Q9NPE6 437 aa21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 CPAMD8Q8IZJ3 1885 aa21.78■■□□□ 1.08
TSPAN4-203ENST00000397397 NME4O00746 187 aa21.77■■□□□ 1.08
TSPAN4-203ENST00000397397 REM1O75628 298 aa21.77■■□□□ 1.08
TSPAN4-203ENST00000397397 KCNK2O95069 426 aa21.77■■□□□ 1.08
TSPAN4-203ENST00000397397 BMP2P12643 396 aa21.77■■□□□ 1.08
TSPAN4-203ENST00000397397 ABCD3P28288 659 aa21.77■■□□□ 1.08
TSPAN4-203ENST00000397397 KRT20P35900 424 aa21.77■■□□□ 1.08
TSPAN4-203ENST00000397397 RFX3P48380 749 aa21.77■■□□□ 1.08
TSPAN4-203ENST00000397397 DCST2Q5T1A1 773 aa21.77■■□□□ 1.08
TSPAN4-203ENST00000397397 CCNJQ5T5M9 372 aa21.77■■□□□ 1.08
TSPAN4-203ENST00000397397 FIGNL1Q6PIW4 674 aa21.77■■□□□ 1.08
TSPAN4-203ENST00000397397 TMEM156Q8N614 296 aa21.77■■□□□ 1.08
TSPAN4-203ENST00000397397 SLC7A6OSQ96CW6 309 aaPredicted RBP21.77■■□□□ 1.08
TSPAN4-203ENST00000397397 PRORYQ9H606 182 aa21.77■■□□□ 1.08
TSPAN4-203ENST00000397397 TMEM181Q9P2C4 612 aa21.77■■□□□ 1.08
TSPAN4-203ENST00000397397 ABCD2Q9UBJ2 740 aa21.77■■□□□ 1.08
TSPAN4-203ENST00000397397 P2RX2Q9UBL9 471 aa21.77■■□□□ 1.08
TSPAN4-203ENST00000397397 MRTO4Q9UKD2 239 aaKnown RBP21.77■■□□□ 1.08
TSPAN4-203ENST00000397397 PTPRQQ9UMZ3 2332 aa21.77■■□□□ 1.07
TSPAN4-203ENST00000397397 GYG2O15488 501 aa21.76■■□□□ 1.07
TSPAN4-203ENST00000397397 AK1P00568 194 aa21.76■■□□□ 1.07
TSPAN4-203ENST00000397397 ITGB2P05107 769 aa21.76■■□□□ 1.07
TSPAN4-203ENST00000397397 SOX3P41225 446 aa21.76■■□□□ 1.07
TSPAN4-203ENST00000397397 RASSF2P50749 326 aa21.76■■□□□ 1.07
TSPAN4-203ENST00000397397 ARHGAP11BQ3KRB8 267 aa21.76■■□□□ 1.07
TSPAN4-203ENST00000397397 HEPHL1Q6MZM0 1159 aa21.76■■□□□ 1.07
TSPAN4-203ENST00000397397 OPN5Q6U736 354 aa21.76■■□□□ 1.07
TSPAN4-203ENST00000397397 GALNT10Q86SR1 603 aa21.76■■□□□ 1.07
TSPAN4-203ENST00000397397 SERPINA11Q86U17 422 aa21.76■■□□□ 1.07
TSPAN4-203ENST00000397397 CDRT15Q96T59 188 aa21.76■■□□□ 1.07
TSPAN4-203ENST00000397397 PRAMEF27A3QJZ7 478 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 TMEM247A6NEH6 219 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 SLC28A2O43868 658 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 OR6B1O95007 311 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 ALPPP05187 535 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 NR2F1P10589 423 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 IL12BP29460 328 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 GZMMP51124 257 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 LIPEQ05469 1076 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 MFAP5Q13361 173 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 SYPL1Q16563 259 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 GPAT3Q53EU6 434 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 LYPD8Q6UX82 237 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 BNC2Q6ZN30 1099 aaPredicted RBP21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 IFNEQ86WN2 208 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 CALHM3Q86XJ0 350 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 ANKFN1Q8N957 763 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 CHDHQ8NE62 594 aaPredicted RBP21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 FAM110BQ8TC76 370 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 MAL2Q969L2 176 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 EFHD2Q96C19 240 aaPredicted RBP21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 BTBD10Q9BSF8 475 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 SPATA9Q9BWV2 254 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 A4GALTQ9NPC4 353 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 RYDENQ9NUL5 291 aaKnown RBP21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 LIPT1Q9Y234 373 aa21.75■■□□□ 1.07
TSPAN4-203ENST00000397397 TSPAN2O60636 221 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 PPM1BO75688 479 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 IL33O95760 270 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 IGKV1D-16P01601 117 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 FBXO45P0C2W1 286 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 ARAFP10398 606 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 NAGAP17050 411 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 TMED10P49755 219 aaKnown RBP21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 PSMD4P55036 377 aaKnown RBP21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 POLE2P56282 527 aa21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 EEFSECP57772 596 aaKnown RBP21.74■■□□□ 1.07
TSPAN4-203ENST00000397397 FUT5Q11128 374 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms