RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 CDC42EP3Q9UKI2 254 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 EMC9Q9Y3B6 208 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 RNF11Q9Y3C5 154 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 ZNF337Q9Y3M9 751 aa13.43□□□□□ -0.26
SEC13-206ENST00000397102 PRR14LQ5THK1 2151 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 SYCE1LA8MT33 242 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 H3BML4 177 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 HAX1O00165 279 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 TP73O15350 636 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 GUCY1B2O75343 617 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 AQP8O94778 261 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 THBS1P07996 1170 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 SOD3P08294 240 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 LTA4HP09960 611 aaKnown RBP13.42□□□□□ -0.26
SEC13-206ENST00000397102 DANCRP0C864 163 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 CT45A8P0DMV1 189 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 CT45A9P0DMV2 189 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 PCSK2P16519 638 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 HK1P19367 917 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 IL12BP29460 328 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 KRT20P35900 424 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 CDKN1AP38936 164 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 PIK3CGP48736 1102 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 MAPK12P53778 367 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 PNLIPRP2P54317 469 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 CLDN20P56880 219 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 PSPHP78330 225 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 DUSP2Q05923 314 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 GTF2H2Q13888 395 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 SLMAPQ14BN4 828 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 KRTAP24-1Q3LI83 254 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 CT45A2Q5DJT8 189 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 GTF2H2CQ6P1K8 395 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 RAPH1Q70E73 1250 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 LARP4Q71RC2 724 aaKnown RBP eCLIP13.42□□□□□ -0.26
SEC13-206ENST00000397102 TBC1D1Q86TI0 1168 aaPredicted RBP13.42□□□□□ -0.26
SEC13-206ENST00000397102 OR2M3Q8NG83 312 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 LILRB1Q8NHL6 650 aaPredicted RBP13.42□□□□□ -0.26
SEC13-206ENST00000397102 TRPC4APQ8TEL6 797 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 KLHL29Q96CT2 875 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 MRPL1Q9BYD6 325 aaKnown RBP13.42□□□□□ -0.26
SEC13-206ENST00000397102 ACTR6Q9GZN1 396 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 DSN1Q9H410 356 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 IPPKQ9H8X2 491 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 AHSPQ9NZD4 102 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 PPP2R2CQ9Y2T4 447 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 ACOT9Q9Y305 439 aa13.42□□□□□ -0.26
SEC13-206ENST00000397102 PCNX3Q9H6A9 2034 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 OR2M5A3KFT3 312 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 C17orf51A8MQB3 221 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 BCAS2O75934 225 aaPredicted RBP13.41□□□□□ -0.26
SEC13-206ENST00000397102 IGHV4-39P01824 125 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 IL11P20809 199 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 SSTR1P30872 391 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 MRPS35P82673 323 aaKnown RBP13.41□□□□□ -0.26
SEC13-206ENST00000397102 LTB4RQ15722 352 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 C6orf52Q5T4I8 152 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 BEND4Q6ZU67 534 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 GOLGA7Q7Z5G4 137 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 CMC1Q7Z7K0 106 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 RHEBL1Q8TAI7 183 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 RAB3IL1Q8TBN0 382 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 ZNF675Q8TD23 568 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 GMPPAQ96IJ6 420 aaPredicted RBP13.41□□□□□ -0.26
SEC13-206ENST00000397102 AMBRA1Q9C0C7 1298 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 ZBTB26Q9HCK0 441 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 SAYSD1Q9NPB0 183 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 WHRNQ9P202 907 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 PSME2Q9UL46 239 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 LIPT1Q9Y234 373 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 GPR52Q9Y2T5 361 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 RNF115Q9Y4L5 304 aa13.41□□□□□ -0.26
SEC13-206ENST00000397102 MAGED1Q9Y5V3 778 aaPredicted RBP13.41□□□□□ -0.26
SEC13-206ENST00000397102 SCO2O43819 266 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 ADAM11O75078 769 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 SS18L1O75177 396 aaPredicted RBP13.4□□□□□ -0.26
SEC13-206ENST00000397102 CLDN9O95484 217 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 GFAPP14136 432 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 PSMB1P20618 241 aaKnown RBP13.4□□□□□ -0.26
SEC13-206ENST00000397102 EVI2BP34910 448 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 SPRP35270 261 aaPredicted RBP13.4□□□□□ -0.26
SEC13-206ENST00000397102 ALDH18A1P54886 795 aaKnown RBP13.4□□□□□ -0.26
SEC13-206ENST00000397102 CTBP2P56545 445 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 CORO7P57737 925 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 MRPS22P82650 360 aaKnown RBP13.4□□□□□ -0.26
SEC13-206ENST00000397102 DR1Q01658 176 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 SGCBQ16585 318 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 PFKFB4Q16877 469 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 METTL4Q8N3J2 472 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 PYROXD1Q8WU10 500 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 SMAP2Q8WU79 429 aaPredicted RBP13.4□□□□□ -0.26
SEC13-206ENST00000397102 NXNL1Q96CM4 212 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 CNRIP1Q96F85 164 aaPredicted RBP13.4□□□□□ -0.26
SEC13-206ENST00000397102 ZNF681Q96N22 645 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 TACO1Q9BSH4 297 aaKnown RBP13.4□□□□□ -0.26
SEC13-206ENST00000397102 PTGES2Q9H7Z7 377 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 LRTM1Q9HBL6 345 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 TMEM160Q9NX00 188 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 AP4B1Q9Y6B7 739 aa13.4□□□□□ -0.26
SEC13-206ENST00000397102 ZNF780BQ9Y6R6 833 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms