RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 BTBD2Q9BX70 525 aa15.13■□□□□ 0.01
AP1S3-202ENST00000396653 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.13■□□□□ 0.01
AP1S3-202ENST00000396653 ANKRD10Q9NXR5 420 aa15.13■□□□□ 0.01
AP1S3-202ENST00000396653 SLC25A37Q9NYZ2 338 aa15.13■□□□□ 0.01
AP1S3-202ENST00000396653 TP53I11O14683 189 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 MRASO14807 208 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 TSPAN2O60636 221 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 CD46P15529 392 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 LCN1P31025 176 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 POU6F2P78424 691 aaPredicted RBP15.12■□□□□ 0.01
AP1S3-202ENST00000396653 KLRB1Q12918 225 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 FADDQ13158 208 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 NFYCQ13952 458 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 EFR3AQ14156 821 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 ZNF169Q14929 603 aaPredicted RBP15.12■□□□□ 0.01
AP1S3-202ENST00000396653 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.12■□□□□ 0.01
AP1S3-202ENST00000396653 TRMT5Q32P41 509 aaKnown RBP15.12■□□□□ 0.01
AP1S3-202ENST00000396653 SLC6A19Q695T7 634 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 TMEM81Q6P7N7 255 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 NUP54Q7Z3B4 507 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 RNF130Q86XS8 419 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 MSRB3Q8IXL7 192 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 PRR22Q8IZ63 422 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 BCORP1Q8N888 145 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 TMEM178AQ8NBL3 297 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 PCYOX1LQ8NBM8 494 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 OR52N2Q8NGI0 321 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 FBXO30Q8TB52 745 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 FAM110BQ8TC76 370 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 PAQR8Q8TEZ7 354 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 DIO2Q92813 273 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 C5orf34Q96MH7 638 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 SIGLEC12Q96PQ1 595 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 YIPF4Q9BSR8 244 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 OR51I1Q9H343 314 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 SH2D2AQ9NP31 389 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 TIMMDC1Q9NPL8 285 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 EXD2Q9NVH0 621 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 VAPAQ9P0L0 249 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 SLAMF8Q9P0V8 285 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 MAP10Q9P2G4 905 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 CORO2BQ9UQ03 480 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 B3GNT3Q9Y2A9 372 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 CSAG2Q9Y5P2 127 aa15.12■□□□□ 0.01
AP1S3-202ENST00000396653 LOC100653049A0A140TA62 436 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 CLIC1O00299 241 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 NME2P1O60361 137 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 REM1O75628 298 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 SLC25A12O75746 678 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 KRT34O76011 436 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 IL33O95760 270 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 F10P00742 488 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 NME2P22392 152 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 IL12BP29460 328 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 MVDP53602 400 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 RPS26P62854 115 aaKnown RBP15.11■□□□□ 0.01
AP1S3-202ENST00000396653 INAQ16352 499 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 ZNF766Q5HY98 468 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 SPINK14Q6IE38 97 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 SLC25A25Q6KCM7 469 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 HEPHL1Q6MZM0 1159 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 RPUSD3Q6P087 351 aaKnown RBP15.11■□□□□ 0.01
AP1S3-202ENST00000396653 ANGPTL8Q6UXH0 198 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 PSD4Q8NDX1 1056 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 CHDHQ8NE62 594 aaPredicted RBP15.11■□□□□ 0.01
AP1S3-202ENST00000396653 CATSPER1Q8NEC5 780 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 OR4N2Q8NGD1 307 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 OR5D16Q8NGK9 328 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 SPPL2AQ8TCT8 520 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 PIK3R3Q92569 461 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 CDS1Q92903 461 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 HGDQ93099 445 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 RMND5BQ96G75 393 aaPredicted RBP15.11■□□□□ 0.01
AP1S3-202ENST00000396653 AURKBQ96GD4 344 aaPredicted RBP15.11■□□□□ 0.01
AP1S3-202ENST00000396653 COL21A1Q96P44 957 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 CGREF1Q99674 301 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 THUMPD1Q9NXG2 353 aaKnown RBP15.11■□□□□ 0.01
AP1S3-202ENST00000396653 CNIH4Q9P003 139 aa15.11■□□□□ 0.01
AP1S3-202ENST00000396653 KLF13Q9Y2Y9 288 aaPredicted RBP15.11■□□□□ 0.01
AP1S3-202ENST00000396653 CHCHD2Q9Y6H1 151 aaPredicted RBP15.11■□□□□ 0.01
AP1S3-202ENST00000396653 GXYLT2A0PJZ3 443 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 ANKRD33BA6NCL7 494 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 KCNK2O95069 426 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 SP1P08047 785 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 GUSBP08236 651 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 BMP2P12643 396 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 FBXW4P57775 412 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 RUNDC3AQ59EK9 446 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 TBCELQ5QJ74 424 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 DCST2Q5T1A1 773 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 ATAD3BQ5T9A4 648 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 TNFAIP8L2Q6P589 184 aaPredicted RBP15.1■□□□□ 0.01
AP1S3-202ENST00000396653 FBXW8Q8N3Y1 598 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 POU5F2Q8N7G0 328 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 TEX19Q8NA77 164 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 FAM13CQ8NE31 585 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 OR10G3Q8NGC4 313 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 RNF138Q8WVD3 245 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 ROPN1LQ96C74 230 aa15.1■□□□□ 0.01
AP1S3-202ENST00000396653 ANKRD27Q96NW4 1050 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms