RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 PPP5CP53041 499 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 ARF3P61204 181 aaPredicted RBP15.7■□□□□ 0.1
NUP50-202ENST00000396096 SIM1P81133 766 aaPredicted RBP15.7■□□□□ 0.1
NUP50-202ENST00000396096 IFITM3Q01628 133 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 CCINQ13939 588 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 KIR2DS5Q14953 304 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 DECR1Q16698 335 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 SYT14P1Q58G82 188 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 TYW3Q6IPR3 259 aaKnown RBP15.7■□□□□ 0.1
NUP50-202ENST00000396096 RASSF6Q6ZTQ3 369 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 SLC22A18ASQ8N1D0 253 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 NANOGP1Q8N7R0 232 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 PROKR2Q8NFJ6 384 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 TOR1AIP2Q8NFQ8 470 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 OR13H1Q8NG92 308 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 CDS1Q92903 461 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 RERGQ96A58 199 aaPredicted RBP15.7■□□□□ 0.1
NUP50-202ENST00000396096 CHCHD6Q9BRQ6 235 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 CDADC1Q9BWV3 514 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 GSDMCQ9BYG8 508 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 IL21RQ9HBE5 538 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 HHATLQ9HCP6 504 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 CTPS2Q9NRF8 586 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 EVA1BQ9NVM1 165 aa15.7■□□□□ 0.1
NUP50-202ENST00000396096 TESQ9UGI8 421 aaKnown RBP15.7■□□□□ 0.1
NUP50-202ENST00000396096 DIMT1Q9UNQ2 313 aaKnown RBP15.7■□□□□ 0.1
NUP50-202ENST00000396096 ZNF443Q9Y2A4 671 aaPredicted RBP15.7■□□□□ 0.1
NUP50-202ENST00000396096 A0A087WV62 115 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 A0A0J9YY10 115 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 FAM170BA6NMN3 283 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 OR5K4A6NMS3 321 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 TLX2O43763 284 aaPredicted RBP15.69■□□□□ 0.1
NUP50-202ENST00000396096 DNAJB6O75190 326 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 CSO75390 466 aaKnown RBP15.69■□□□□ 0.1
NUP50-202ENST00000396096 OR5F1O95221 314 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 IGHV4-34P06331 123 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 CCNYL3P0C7X3 344 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 GLULP15104 373 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 TRHRP34981 398 aaPredicted RBP15.69■□□□□ 0.1
NUP50-202ENST00000396096 OMPP47874 163 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 LSSP48449 732 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 SPHARQ15513 63 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 PUS10Q3MIT2 529 aaKnown RBP15.69■□□□□ 0.1
NUP50-202ENST00000396096 GDPGP1Q6ZNW5 385 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 PRICKLE2Q7Z3G6 844 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 CLIP4Q8N3C7 705 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 ZNF655Q8N720 491 aaPredicted RBP15.69■□□□□ 0.1
NUP50-202ENST00000396096 ACOT11Q8WXI4 607 aaPredicted RBP15.69■□□□□ 0.1
NUP50-202ENST00000396096 FAM3CQ92520 227 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 ZNF582Q96NG8 517 aaPredicted RBP15.69■□□□□ 0.1
NUP50-202ENST00000396096 PLA2G12AQ9BZM1 189 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 ARMC7Q9H6L4 198 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 FUOMA2VDF0 154 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 SHISA7A6NL88 538 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 CPSF4LA6NMK7 179 aaKnown RBP15.69■□□□□ 0.1
NUP50-202ENST00000396096 FRS3O43559 492 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 UBXN7O94888 489 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 ATP1B1P05026 303 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 THBS1P07996 1170 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 ACP2P11117 423 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 RGS8P57771 180 aaPredicted RBP15.69■□□□□ 0.1
NUP50-202ENST00000396096 COL19A1Q14993 1142 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 DUSP5Q16690 384 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 TRIM16LQ309B1 348 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 SOWAHCQ53LP3 525 aaPredicted RBP15.69■□□□□ 0.1
NUP50-202ENST00000396096 SLC27A4Q6P1M0 643 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 PEX5LQ8IYB4 626 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 SLC34A3Q8N130 599 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 SLC44A3Q8N4M1 653 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 PIGXQ8TBF5 258 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 TEX47Q8TBZ9 253 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 TMEM163Q8TC26 289 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 COL26A1Q96A83 441 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 GDF15Q99988 308 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 PRR14Q9BWN1 585 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 PIGUQ9H490 435 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 RNF167Q9H6Y7 350 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 GPR27Q9NS67 375 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 TMEM74BQ9NUR3 256 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 CLEC2DQ9UHP7 191 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 ZNF232Q9UNY5 417 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 MRPS2Q9Y399 296 aaKnown RBP15.69■□□□□ 0.1
NUP50-202ENST00000396096 WDR45Q9Y484 360 aa15.69■□□□□ 0.1
NUP50-202ENST00000396096 IRGMA1A4Y4 181 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 AGAP5A6NIR3 686 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 AP3D1O14617 1153 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 KLF4O43474 513 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 RPS4Y1P22090 263 aaKnown RBP15.68■□□□□ 0.1
NUP50-202ENST00000396096 FPR3P25089 353 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 STAT5AP42229 794 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 BCAP31P51572 246 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 GAS1P54826 345 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 DUSP8Q13202 625 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 KLHL22Q53GT1 634 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 KIAA0895LQ68EN5 471 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 ZNF730Q6ZMV8 503 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 BCDIN3DQ7Z5W3 292 aaKnown RBP15.68■□□□□ 0.1
NUP50-202ENST00000396096 OR4N5Q8IXE1 308 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 HMGB4Q8WW32 186 aa15.68■□□□□ 0.1
NUP50-202ENST00000396096 PATE1Q8WXA2 126 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms