RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ZCCHC3Q9NUD5 404 aaKnown RBP15.2■□□□□ 0.02
CXCL1-201ENST00000395761 TUBA8Q9NY65 449 aaPredicted RBP15.2■□□□□ 0.02
CXCL1-201ENST00000395761 VPS4AQ9UN37 437 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 OR10H1Q9Y4A9 318 aa15.2■□□□□ 0.02
CXCL1-201ENST00000395761 NPIPA5E9PKD4 350 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 WISP1O95388 367 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 HMGN2P05204 90 aaKnown RBP15.19■□□□□ 0.02
CXCL1-201ENST00000395761 PGRP06401 933 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 ACP2P11117 423 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 TMED10P49755 219 aaKnown RBP15.19■□□□□ 0.02
CXCL1-201ENST00000395761 PRR5P85299 388 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 FOXO1Q12778 655 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 TP53BP2Q13625 1128 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 ZNHIT3Q15649 155 aaPredicted RBP15.19■□□□□ 0.02
CXCL1-201ENST00000395761 DPY19L1Q2PZI1 675 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 CYP27C1Q4G0S4 372 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 EXOSC6Q5RKV6 272 aaKnown RBP15.19■□□□□ 0.02
CXCL1-201ENST00000395761 MFSD12Q6NUT3 480 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 NUP54Q7Z3B4 507 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 CDRT4Q8N9R6 151 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 POGLUT1Q8NBL1 392 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 GPR151Q8TDV0 419 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 SLC9A6Q92581 669 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 EFHD2Q96C19 240 aaPredicted RBP15.19■□□□□ 0.02
CXCL1-201ENST00000395761 COL21A1Q96P44 957 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 LRRC37BQ96QE4 947 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 OR52E6Q96RD3 313 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 GPATCH2Q9NW75 528 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 CNIH4Q9P003 139 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 CBLCQ9ULV8 474 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 NPIPA1Q9UND3 350 aa15.19■□□□□ 0.02
CXCL1-201ENST00000395761 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.19■□□□□ 0.02
CXCL1-201ENST00000395761 HELZ2Q9BYK8 2649 aaKnown RBP15.19■□□□□ 0.02
CXCL1-201ENST00000395761 FASNP49327 2511 aaKnown RBP15.18■□□□□ 0.02
CXCL1-201ENST00000395761 EML6Q6ZMW3 1958 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 GCN1Q92616 2671 aaKnown RBP15.18■□□□□ 0.02
CXCL1-201ENST00000395761 OR6C70A6NIJ9 312 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 FAM166BA8MTA8 275 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 HS6ST1O60243 411 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 GLSO94925 669 aaPredicted RBP15.18■□□□□ 0.02
CXCL1-201ENST00000395761 NKX2-2O95096 273 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 EDN3P14138 238 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 ZNF24P17028 368 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 SOAT1P35610 550 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 CASP3P42574 277 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 KCNJ2P63252 427 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 KLF10Q13118 480 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 LASP1Q14847 261 aaKnown RBP15.18■□□□□ 0.02
CXCL1-201ENST00000395761 DUSP5Q16690 384 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 FAM91A1Q658Y4 838 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 ST6GALNAC3Q8NDV1 305 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 VPS37AQ8NEZ2 397 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 OR56A1Q8NGH5 318 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 SFXN5Q8TD22 340 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 TSPEARQ8WU66 669 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 NTNG2Q96CW9 530 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 SLC35A4Q96G79 324 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 CCDC115Q96NT0 180 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 SECISBP2Q96T21 854 aaKnown RBP15.18■□□□□ 0.02
CXCL1-201ENST00000395761 INPP5KQ9BT40 448 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 CCDC106Q9BWC9 280 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 ANGPTL4Q9BY76 406 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 TTTY12Q9BZ98 90 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 NEUROD4Q9HD90 331 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 Q9N2J8 555 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 FAM120CQ9NX05 1096 aaKnown RBP15.18■□□□□ 0.02
CXCL1-201ENST00000395761 BTNL2Q9UIR0 455 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 PCDHGB4Q9UN71 923 aa15.18■□□□□ 0.02
CXCL1-201ENST00000395761 FAM234BA2RU67 622 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 ANKRD33BA6NCL7 494 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 ANKUB1A6NFN9 424 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 TTC36A6NLP5 189 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 IGKV1D-16P01601 117 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 C1QCP02747 245 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 CYP4B1P13584 511 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 CD1EP15812 388 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 IL12BP29460 328 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 KRT20P35900 424 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 PTGDSP41222 190 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 RFX3P48380 749 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 POLR2JP52435 117 aaKnown RBP15.17■□□□□ 0.02
CXCL1-201ENST00000395761 PNLIPRP2P54317 469 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 KCNK10P57789 538 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 RPS26P62854 115 aaKnown RBP15.17■□□□□ 0.02
CXCL1-201ENST00000395761 PPIAP62937 165 aaKnown RBP15.17■□□□□ 0.02
CXCL1-201ENST00000395761 PSPHP78330 225 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 PLGLB1Q02325 96 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 DECR1Q16698 335 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 ZCCHC12Q6PEW1 402 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 GK5Q6ZS86 529 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 GALNT10Q86SR1 603 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 FUNDC1Q8IVP5 155 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 OR52N2Q8NGI0 321 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 JADE3Q92613 823 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 RMND5BQ96G75 393 aaPredicted RBP15.17■□□□□ 0.02
CXCL1-201ENST00000395761 JSRP1Q96MG2 331 aaPredicted RBP15.17■□□□□ 0.02
CXCL1-201ENST00000395761 DOHHQ9BU89 302 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 FLRT3Q9NZU0 649 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 KCNE3Q9Y6H6 103 aa15.17■□□□□ 0.02
CXCL1-201ENST00000395761 NUP214P35658 2090 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms