RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 GPR55Q9Y2T6 319 aaPredicted RBP13.46□□□□□ -0.25
CLIP2-203ENST00000395060 ZMYND11Q15326 602 aa13.46□□□□□ -0.26
CLIP2-203ENST00000395060 ZNF783Q6ZMS7 281 aa13.46□□□□□ -0.26
CLIP2-203ENST00000395060 OR5AR1Q8NGP9 310 aa13.46□□□□□ -0.26
CLIP2-203ENST00000395060 SMPDL3AQ92484 453 aa13.46□□□□□ -0.26
CLIP2-203ENST00000395060 RFT1Q96AA3 541 aa13.46□□□□□ -0.26
CLIP2-203ENST00000395060 ABHD1Q96SE0 405 aa13.46□□□□□ -0.26
CLIP2-203ENST00000395060 ARHGAP9Q9BRR9 750 aa13.46□□□□□ -0.26
CLIP2-203ENST00000395060 MYNNQ9NPC7 610 aa13.46□□□□□ -0.26
CLIP2-203ENST00000395060 PCDHGB7Q9Y5F8 929 aa13.46□□□□□ -0.26
CLIP2-203ENST00000395060 ARID1BQ8NFD5 2236 aaPredicted RBP13.46□□□□□ -0.26
CLIP2-203ENST00000395060 TEX13CA0A0J9YWL9 993 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 KPNA3O00505 521 aaPredicted RBP13.45□□□□□ -0.26
CLIP2-203ENST00000395060 PIP5K1CO60331 668 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 EPHA5P54756 1037 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 TPBGQ13641 420 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 SLC8B1Q6J4K2 584 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 KANSL1Q7Z3B3 1105 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 SLC43A3Q8NBI5 491 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 ORAI3Q9BRQ5 295 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 RBCK1Q9BYM8 510 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 SPRTNQ9H040 489 aaPredicted RBP13.45□□□□□ -0.26
CLIP2-203ENST00000395060 CHST2Q9Y4C5 530 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 KIAA0100Q14667 2235 aaKnown RBP13.45□□□□□ -0.26
CLIP2-203ENST00000395060 A8MVJ9 347 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 GATBO75879 557 aaKnown RBP13.45□□□□□ -0.26
CLIP2-203ENST00000395060 POP4O95707 220 aaKnown RBP13.45□□□□□ -0.26
CLIP2-203ENST00000395060 ACP5P13686 325 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 STOMP27105 288 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 VIPR1P32241 457 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 GAS1P54826 345 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 C21orf58P58505 322 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 EXOSC2Q13868 293 aaKnown RBP13.45□□□□□ -0.26
CLIP2-203ENST00000395060 PDE7AQ13946 482 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 C3orf38Q5JPI3 329 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 TIGD3Q6B0B8 471 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 MZT2AQ6P582 158 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 NXPE4Q6UWF7 544 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 VRK2Q86Y07 508 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 ZFP64Q9NPA5 681 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 NLGN3Q9NZ94 848 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 FLVCR2Q9UPI3 526 aa13.45□□□□□ -0.26
CLIP2-203ENST00000395060 TMPRSS11DO60235 418 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 TSPAN9O75954 239 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 HLA-DPB1P04440 258 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 PROS1P07225 676 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 ELFN1P0C7U0 828 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 ATP12AP54707 1039 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 SFRP4Q6FHJ7 346 aaPredicted RBP13.44□□□□□ -0.26
CLIP2-203ENST00000395060 GAREM2Q75VX8 874 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 LUZP2Q86TE4 346 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 CPOQ8IVL8 374 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 NKAIN4Q8IVV8 208 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 SIRT6Q8N6T7 355 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 LSMEM1Q8N8F7 131 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 OR10H4Q8NGA5 316 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 DNAJA4Q8WW22 397 aaPredicted RBP13.44□□□□□ -0.26
CLIP2-203ENST00000395060 HSD17B8Q92506 261 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 GLYATL1Q969I3 302 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 ORAI1Q96D31 301 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 LYSMD1Q96S90 227 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 C17orf62Q9BQA9 187 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 ELAC1Q9H777 363 aaKnown RBP13.44□□□□□ -0.26
CLIP2-203ENST00000395060 TAS2R7Q9NYW3 318 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 EPPINO95925 133 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 SPTBP11277 2137 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 KELP23276 732 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 RGS1Q08116 209 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 KCNC3Q14003 757 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 SLC25A35Q3KQZ1 300 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 PLBD1Q6P4A8 553 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 SLC9B2Q86UD5 537 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 CCDC116Q8IYX3 515 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 OR2A12Q8NGT7 310 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 NEURL3Q96EH8 262 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 IGSF21Q96ID5 467 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 SLC38A2Q96QD8 506 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 H2AFY2Q9P0M6 372 aaPredicted RBP13.44□□□□□ -0.26
CLIP2-203ENST00000395060 SLC25A13Q9UJS0 675 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 MYO15AQ9UKN7 3530 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 SERTM1A2A2V5 107 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 E9PI62 339 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 MMP20O60882 483 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 RGS11O94810 467 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 DHFRP00374 187 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 CHRM4P08173 479 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 ATXN8OSP0DMR3 200 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 RAB40BQ12829 278 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 ZNF155Q12901 538 aaPredicted RBP13.44□□□□□ -0.26
CLIP2-203ENST00000395060 BTN1A1Q13410 526 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 SNTA1Q13424 505 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 OR4Q3Q8NH05 313 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 TM4SF18Q96CE8 201 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 SLC35G5Q96KT7 338 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 EFCAB11Q9BUY7 163 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 MRPL9Q9BYD2 267 aaKnown RBP13.44□□□□□ -0.26
CLIP2-203ENST00000395060 MS4A7Q9GZW8 240 aaPredicted RBP13.44□□□□□ -0.26
CLIP2-203ENST00000395060 OR51V1Q9H2C8 321 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 B3GNT2Q9NY97 397 aa13.44□□□□□ -0.26
CLIP2-203ENST00000395060 RDH8Q9NYR8 311 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms