RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 LARP4Q71RC2 724 aaKnown RBP eCLIP19.07■□□□□ 0.643e-6■■□□□ 13
TRAF4-203ENST00000394925 CCDC116Q8IYX3 515 aa19.07■□□□□ 0.64
TRAF4-203ENST00000394925 OR4K17Q8NGC6 315 aa19.07■□□□□ 0.64
TRAF4-203ENST00000394925 FIG4Q92562 907 aa19.07■□□□□ 0.64
TRAF4-203ENST00000394925 BTBD9Q96Q07 612 aa19.07■□□□□ 0.64
TRAF4-203ENST00000394925 SLC39A3Q9BRY0 314 aa19.07■□□□□ 0.64
TRAF4-203ENST00000394925 FAIM2Q9BWQ8 316 aa19.07■□□□□ 0.64
TRAF4-203ENST00000394925 ELOVL5Q9NYP7 299 aa19.07■□□□□ 0.64
TRAF4-203ENST00000394925 UTS2RQ9UKP6 389 aa19.07■□□□□ 0.64
TRAF4-203ENST00000394925 USF3Q68DE3 2245 aa19.06■□□□□ 0.64
TRAF4-203ENST00000394925 RAI1Q7Z5J4 1906 aaPredicted RBP19.06■□□□□ 0.64
TRAF4-203ENST00000394925 C16orf97H3BN30 126 aa19.06■□□□□ 0.64
TRAF4-203ENST00000394925 BCAS2O75934 225 aaPredicted RBP19.06■□□□□ 0.64
TRAF4-203ENST00000394925 CT45A8P0DMV1 189 aa19.06■□□□□ 0.64
TRAF4-203ENST00000394925 CT45A9P0DMV2 189 aa19.06■□□□□ 0.64
TRAF4-203ENST00000394925 PEPDP12955 493 aa19.06■□□□□ 0.64
TRAF4-203ENST00000394925 CAV1Q03135 178 aa19.06■□□□□ 0.64
TRAF4-203ENST00000394925 C2orf54Q08AI8 447 aa19.06■□□□□ 0.64
TRAF4-203ENST00000394925 GGTA1PQ4G0N0 100 aa19.06■□□□□ 0.64
TRAF4-203ENST00000394925 CT45A2Q5DJT8 189 aa19.06■□□□□ 0.64
TRAF4-203ENST00000394925 ZNF628Q5EBL2 1059 aa19.06■□□□□ 0.64
TRAF4-203ENST00000394925 FAM219BQ5XKK7 198 aa19.06■□□□□ 0.64
TRAF4-203ENST00000394925 RPS27LQ71UM5 84 aaKnown RBP19.06■□□□□ 0.64
TRAF4-203ENST00000394925 MEIOBQ8N635 442 aa19.06■□□□□ 0.64
TRAF4-203ENST00000394925 SPATA4Q8NEY3 305 aa19.06■□□□□ 0.64
TRAF4-203ENST00000394925 SELENOMQ8WWX9 145 aa19.06■□□□□ 0.64
TRAF4-203ENST00000394925 KAT2AQ92830 837 aa19.06■□□□□ 0.64
TRAF4-203ENST00000394925 ZNF845Q96IR2 970 aaPredicted RBP19.06■□□□□ 0.64
TRAF4-203ENST00000394925 MARK4Q96L34 752 aa19.06■□□□□ 0.64
TRAF4-203ENST00000394925 TRPS1Q9UHF7 1281 aa19.06■□□□□ 0.64
TRAF4-203ENST00000394925 UTP11Q9Y3A2 253 aaKnown RBP19.06■□□□□ 0.64
TRAF4-203ENST00000394925 H0YC42 278 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 STX16-NPEPL1H3BU86 382 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 STX16O14662 325 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 CNOT4O95628 575 aaKnown RBP19.05■□□□□ 0.64
TRAF4-203ENST00000394925 ESRRBO95718 433 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 PTH2RP49190 550 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 GAS1P54826 345 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 TPD52P55327 224 aaPredicted RBP19.05■□□□□ 0.64
TRAF4-203ENST00000394925 DSCR4P56555 118 aaPredicted RBP19.05■□□□□ 0.64
TRAF4-203ENST00000394925 CLDN15P56746 228 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 GUCY2DQ02846 1103 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 ANKRD34AQ69YU3 496 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 ZDHHC24Q6UX98 284 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 NPSR1Q6W5P4 371 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 C22orf34Q6ZV56 151 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 C1orf52Q8N6N3 182 aaKnown RBP19.05■□□□□ 0.64
TRAF4-203ENST00000394925 GBP7Q8N8V2 638 aaPredicted RBP19.05■□□□□ 0.64
TRAF4-203ENST00000394925 ZNF610Q8N9Z0 462 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 ZNF675Q8TD23 568 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 EFHD2Q96C19 240 aaPredicted RBP19.05■□□□□ 0.64
TRAF4-203ENST00000394925 HBEGFQ99075 208 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 PINK1Q9BXM7 581 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 GSX2Q9BZM3 304 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 DSN1Q9H410 356 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 PCNX3Q9H6A9 2034 aa19.05■□□□□ 0.64
TRAF4-203ENST00000394925 PPP6CO00743 305 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 EMC8O43402 210 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 SCO2O43819 266 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 SMIM24O75264 130 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 CGAP01215 116 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 RBP1P09455 135 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 LOXP28300 417 aaPredicted RBP19.04■□□□□ 0.64
TRAF4-203ENST00000394925 PNLIPRP2P54317 469 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 TRA2BP62995 288 aaKnown RBP19.04■□□□□ 0.64
TRAF4-203ENST00000394925 ERCC6LQ2NKX8 1250 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 RAET1LQ5VY80 246 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 LETMD1Q6P1Q0 360 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 OR9A2Q8NGT5 310 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 RNF138Q8WVD3 245 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 VSTM2LQ96N03 204 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 BRF2Q9HAW0 419 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 PPP4R1LQ9P1A2 415 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 XPR1Q9UBH6 696 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 ADAM21Q9UKJ8 722 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 TMCO1Q9UM00 188 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 SNX6Q9UNH7 406 aa19.04■□□□□ 0.64
TRAF4-203ENST00000394925 SONP18583 2426 aaKnown RBP19.04■□□□□ 0.64
TRAF4-203ENST00000394925 SEC14L5O43304 696 aa19.03■□□□□ 0.64
TRAF4-203ENST00000394925 TSPAN8P19075 237 aa19.03■□□□□ 0.64
TRAF4-203ENST00000394925 HK1P19367 917 aa19.03■□□□□ 0.64
TRAF4-203ENST00000394925 SUCLG1P53597 346 aaKnown RBP19.03■□□□□ 0.64
TRAF4-203ENST00000394925 EEFSECP57772 596 aaKnown RBP19.03■□□□□ 0.64
TRAF4-203ENST00000394925 PLEKHM3Q6ZWE6 761 aa19.03■□□□□ 0.64
TRAF4-203ENST00000394925 CXXC5Q7LFL8 322 aaKnown RBP19.03■□□□□ 0.64
TRAF4-203ENST00000394925 SLC44A2Q8IWA5 706 aaPredicted RBP19.03■□□□□ 0.64
TRAF4-203ENST00000394925 OR4N2Q8NGD1 307 aa19.03■□□□□ 0.64
TRAF4-203ENST00000394925 OR5M1Q8NGP8 315 aa19.03■□□□□ 0.64
TRAF4-203ENST00000394925 FNDC9Q8TBE3 224 aa19.03■□□□□ 0.64
TRAF4-203ENST00000394925 REPIN1Q9BWE0 567 aaKnown RBP19.03■□□□□ 0.64
TRAF4-203ENST00000394925 KLHL4Q9C0H6 718 aa19.03■□□□□ 0.64
TRAF4-203ENST00000394925 FOLH1BQ9HBA9 442 aa19.03■□□□□ 0.64
TRAF4-203ENST00000394925 NMRK1Q9NWW6 199 aa19.03■□□□□ 0.64
TRAF4-203ENST00000394925 ZNF337Q9Y3M9 751 aa19.03■□□□□ 0.64
TRAF4-203ENST00000394925 STAB1Q9NY15 2570 aa19.03■□□□□ 0.64
TRAF4-203ENST00000394925 TNFRSF21O75509 655 aa19.02■□□□□ 0.64
TRAF4-203ENST00000394925 OTCP00480 354 aa19.02■□□□□ 0.64
TRAF4-203ENST00000394925 IL3P08700 152 aa19.02■□□□□ 0.64
TRAF4-203ENST00000394925 CD8BP10966 210 aa19.02■□□□□ 0.64
TRAF4-203ENST00000394925 CDH13P55290 713 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms