RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CDKN3Q16667 212 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 TMEM53Q6P2H8 277 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 LIPIQ6XZB0 460 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 SYNPOQ8N3V7 929 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 MRPL43Q8N983 215 aaKnown RBP9.84□□□□□ -0.83
COL4A6-203ENST00000394872 TBC1D15Q8TC07 691 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 IL26Q9NPH9 171 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 DNAJC25-GNG10A0A024R161 153 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 INMT-MINDY4F8WBC2 141 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 SMAD6O43541 496 aaKnown RBP9.84□□□□□ -0.83
COL4A6-203ENST00000394872 CD68P34810 354 aaPredicted RBP9.84□□□□□ -0.83
COL4A6-203ENST00000394872 SLC6A11P48066 632 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 EEF1A2Q05639 463 aaKnown RBP9.84□□□□□ -0.83
COL4A6-203ENST00000394872 NPRL3Q12980 569 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 EIF2B1Q14232 305 aaKnown RBP9.84□□□□□ -0.83
COL4A6-203ENST00000394872 DCP2Q8IU60 420 aaKnown RBP9.84□□□□□ -0.83
COL4A6-203ENST00000394872 MINDY1Q8N5J2 469 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 ACBD7Q8N6N7 88 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 ISOC1Q96CN7 298 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 PGAP3Q96FM1 320 aaPredicted RBP9.84□□□□□ -0.83
COL4A6-203ENST00000394872 METTL2AQ96IZ6 378 aaKnown RBP9.84□□□□□ -0.83
COL4A6-203ENST00000394872 IGSF5Q9NSI5 407 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 IL20RAQ9UHF4 553 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 STUB1Q9UNE7 303 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 KIR2DS5A0A0G2JLQ3 304 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 A0A0G2JNG1 304 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 AGAP5A6NIR3 686 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 SOBPA7XYQ1 873 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 KIR2DS3K7RE56 304 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 SYT7O43581 403 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 ADAMTS4O75173 837 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 GJA5P36382 358 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 KIR2DS5Q14953 304 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 HTR3DQ70Z44 454 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 IGFN1Q86VF2 1251 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 ZFP41Q8N8Y5 198 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 OR6Q1Q8NGQ2 317 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 COQ8AQ8NI60 647 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 C16orf58Q96GQ5 468 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 INPP5KQ9BT40 448 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 OR51B6Q9H340 312 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 DMRT3Q9NQL9 472 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 MCTS1Q9ULC4 181 aaKnown RBP9.84□□□□□ -0.83
COL4A6-203ENST00000394872 NAALAD2Q9Y3Q0 740 aa9.84□□□□□ -0.83
COL4A6-203ENST00000394872 PCDH17O14917 1159 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 YY2O15391 372 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 SSX5O60225 188 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 STSP08842 583 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 POU3F2P20265 443 aaPredicted RBP9.83□□□□□ -0.84
COL4A6-203ENST00000394872 DAP3P51398 398 aaKnown RBP9.83□□□□□ -0.84
COL4A6-203ENST00000394872 C6orf141Q5SZD1 244 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 PGM2L1Q6PCE3 622 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 UGT2A3Q6UWM9 527 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 MCATQ8IVS2 390 aaKnown RBP9.83□□□□□ -0.84
COL4A6-203ENST00000394872 RLN3Q8WXF3 142 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 SYT4Q9H2B2 425 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 ABRACLQ9P1F3 81 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 HIF3AQ9Y2N7 669 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 A8MV72 311 aaPredicted RBP9.83□□□□□ -0.84
COL4A6-203ENST00000394872 HTR3BO95264 441 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 LSSP48449 732 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 PSPHP78330 225 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 PARS2Q7L3T8 475 aaKnown RBP9.83□□□□□ -0.84
COL4A6-203ENST00000394872 MRPL21Q7Z2W9 205 aaKnown RBP9.83□□□□□ -0.84
COL4A6-203ENST00000394872 TMIEQ8NEW7 156 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 OR5AK2Q8NH90 309 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 TANKQ92844 425 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 DTD2Q96FN9 168 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 TREX2Q9BQ50 279 aaPredicted RBP9.83□□□□□ -0.84
COL4A6-203ENST00000394872 PAPOLGQ9BWT3 736 aaKnown RBP9.83□□□□□ -0.84
COL4A6-203ENST00000394872 TRBV11-1A0A0K0K1C0 115 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 TNFRSF1BP20333 461 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 CD40LGP29965 261 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 USF2Q15853 346 aaPredicted RBP9.83□□□□□ -0.84
COL4A6-203ENST00000394872 C6orf183Q5T699 404 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 UBE2UQ5VVX9 321 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 SHFQ7M4L6 423 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 ABHD12BQ7Z5M8 362 aaPredicted RBP9.83□□□□□ -0.84
COL4A6-203ENST00000394872 ISCA2Q86U28 154 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 CPXM2Q8N436 756 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 EID2Q8N6I1 236 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 CDRT4Q8N9R6 151 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 RHBDF1Q96CC6 855 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 SLC45A3Q96JT2 553 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 PREBQ9HCU5 417 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 SRPK3Q9UPE1 567 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 GPR52Q9Y2T5 361 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 MYH11P35749 1972 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 I3L521 148 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 ARHGEF15O94989 841 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 PABPC4LP0CB38 370 aaKnown RBP9.83□□□□□ -0.84
COL4A6-203ENST00000394872 UBL4AP11441 157 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 ZNF182P17025 639 aaPredicted RBP9.83□□□□□ -0.84
COL4A6-203ENST00000394872 GGT1P19440 569 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 CDKN2CP42773 168 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 MAGEA3P43357 314 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 TM4SF4P48230 202 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 PRPS1P60891 318 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 MFSD13AQ14CX5 517 aa9.83□□□□□ -0.84
COL4A6-203ENST00000394872 XKR5Q6UX68 686 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms