RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 SOCS6O14544 535 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 NARSO43776 548 aaKnown RBP12.46□□□□□ -0.42
NFKB1-202ENST00000394820 LATS1O95835 1130 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 CEBPBP17676 345 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 PSPHP78330 225 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 BNC1Q01954 994 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 OTPQ5XKR4 325 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 XKRXQ6PP77 449 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 PARS2Q7L3T8 475 aaKnown RBP12.46□□□□□ -0.42
NFKB1-202ENST00000394820 TECPR1Q7Z6L1 1165 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 TMEFF1Q8IYR6 380 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 OR8S1Q8NH09 359 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 SNX18Q96RF0 628 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 HCN3Q9P1Z3 774 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 USP36Q9P275 1121 aaKnown RBP12.46□□□□□ -0.42
NFKB1-202ENST00000394820 STOML2Q9UJZ1 356 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 CABIN1Q9Y6J0 2220 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 PAK4O96013 591 aaPredicted RBP12.46□□□□□ -0.42
NFKB1-202ENST00000394820 HMGN2P05204 90 aaKnown RBP12.46□□□□□ -0.42
NFKB1-202ENST00000394820 FBXO45P0C2W1 286 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 ARSBP15848 533 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 PTX3P26022 381 aaPredicted RBP12.46□□□□□ -0.42
NFKB1-202ENST00000394820 FGL2Q14314 439 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 CPXM2Q8N436 756 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 C1orf216Q8TAB5 229 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 CXorf40AQ8TE69 158 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 UBE2E3Q969T4 207 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 MCCC1Q96RQ3 725 aaPredicted RBP12.46□□□□□ -0.42
NFKB1-202ENST00000394820 SPATA9Q9BWV2 254 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 DPH1Q9BZG8 443 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 NLGN3Q9NZ94 848 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 KLK4Q9Y5K2 254 aa12.46□□□□□ -0.42
NFKB1-202ENST00000394820 OR7A10O76100 309 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 GNRH1P01148 92 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 MMP11P24347 488 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 ADH7P40394 386 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 DHCR24Q15392 516 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 FAM46CQ5VWP2 391 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 FIGNL1Q6PIW4 674 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 AMZ2Q86W34 360 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 OR8J2Q8NGG1 315 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 OR52I1Q8NGK6 324 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 OR1A2Q9Y585 309 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 ZNF780BQ9Y6R6 833 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 APOC3P02656 99 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 SCG5P05408 212 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 NT5EP21589 574 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 UGT2B10P36537 528 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 GALK2Q01415 458 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 DSG2Q14126 1118 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 EIF4HQ15056 248 aaKnown RBP12.45□□□□□ -0.42
NFKB1-202ENST00000394820 MLIPQ5VWP3 458 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 METTL2BQ6P1Q9 378 aaKnown RBP12.45□□□□□ -0.42
NFKB1-202ENST00000394820 FAHD1Q6P587 224 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 DGLUCYQ7Z3D6 616 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 ZNF655Q8N720 491 aaPredicted RBP12.45□□□□□ -0.42
NFKB1-202ENST00000394820 BBS1Q8NFJ9 593 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 CHAC2Q8WUX2 184 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 TNFAIP8L1Q8WVP5 186 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 SLC25A18Q9H1K4 315 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 RDH14Q9HBH5 336 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 CHD7Q9P2D1 2997 aa12.45□□□□□ -0.42
NFKB1-202ENST00000394820 OR52A4PA6NMU1 304 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 POLR1CO15160 346 aaPredicted RBP12.44□□□□□ -0.42
NFKB1-202ENST00000394820 STX11O75558 287 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 ALX3O95076 343 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 ALPPP05187 535 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 UQCRC2P22695 453 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 PSMB10P40306 273 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 MAPK9P45984 424 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 HCCSP53701 268 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 SNTB2Q13425 540 aaKnown RBP12.44□□□□□ -0.42
NFKB1-202ENST00000394820 ZNF805Q5CZA5 627 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 PLEKHS1Q5SXH7 462 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 HES5Q5TA89 166 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 LIPIQ6XZB0 460 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 SLC36A4Q6YBV0 504 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 GET4Q7L5D6 327 aaPredicted RBP12.44□□□□□ -0.42
NFKB1-202ENST00000394820 ANKRD33Q7Z3H0 272 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 C12orf40Q86WS4 652 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 HHIPL1Q96JK4 782 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 THAP7Q9BT49 309 aaPredicted RBP12.44□□□□□ -0.42
NFKB1-202ENST00000394820 PAK6Q9NQU5 681 aaPredicted RBP12.44□□□□□ -0.42
NFKB1-202ENST00000394820 GRXCR1A8MXD5 290 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 ZNF670-ZNF695F2Z2N8 137 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 NUDT14O95848 222 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 ADAP00813 363 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 SNRPBP14678 240 aaKnown RBP12.44□□□□□ -0.42
NFKB1-202ENST00000394820 ANXA11P50995 505 aaKnown RBP12.44□□□□□ -0.42
NFKB1-202ENST00000394820 BTN3A2P78410 334 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 FABP5Q01469 135 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 TCTN3Q6NUS6 607 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 KANSL1Q7Z3B3 1105 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 COMMD7Q86VX2 200 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 SLC38A6Q8IZM9 456 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 SUSD6Q92537 303 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 ZNF559Q9BR84 538 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 KATNB1Q9BVA0 655 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 SPATA5L1Q9BVQ7 753 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 DMRT3Q9NQL9 472 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms