RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 ALOX5P09917 674 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 POLR2CP19387 275 aaPredicted RBP14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 ZNF10P21506 573 aaPredicted RBP14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 SOX18P35713 384 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 PDX1P52945 283 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 TSPAN31Q12999 210 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 SPHARQ15513 63 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 DEFB134Q4QY38 66 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 EOGTQ5NDL2 527 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 TMEM53Q6P2H8 277 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 FRRS1Q6ZNA5 592 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 GDPGP1Q6ZNW5 385 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 OR52P1PQ8NH57 321 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 SLX1AQ9BQ83 275 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 PRR14Q9BWN1 585 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 MND1Q9BWT6 205 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 TRIM45Q9H8W5 580 aaPredicted RBP14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 CTPS2Q9NRF8 586 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 SEMA4GQ9NTN9 838 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 KLHL28Q9NXS3 571 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 CLEC2DQ9UHP7 191 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 ENTPD2Q9Y5L3 495 aa14.35□□□□□ -0.11
UBE2D3-207ENST00000394801 OR6C74A6NCV1 312 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 CSO75390 466 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 LTBRP36941 435 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 ARHGAP11BQ3KRB8 267 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 RASSF6Q6ZTQ3 369 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 ABHD13Q7L211 337 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 PRICKLE2Q7Z3G6 844 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 BCDIN3DQ7Z5W3 292 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 SLC34A3Q8N130 599 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 CYP4Z2PQ8N1L4 340 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 RPLP0P6Q8NHW5 317 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 GPBAR1Q8TDU6 330 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 RSC1A1Q92681 617 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 MSLNLQ96KJ4 702 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 ZFYVE21Q9BQ24 234 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 LYRM4Q9HD34 91 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 DIMT1Q9UNQ2 313 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 ARHGEF17Q96PE2 2063 aaPredicted RBP14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 FAM221BA6H8Z2 402 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 AQP9O43315 295 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 DNAJB6O75190 326 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 ALOX12P18054 663 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 TGM1P22735 817 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 IFNA8P32881 189 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 TRHRP34981 398 aaPredicted RBP14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 TFF2Q03403 129 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 ILF3Q12906 894 aaKnown RBP eCLIP14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 EXOSC6Q5RKV6 272 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 MANEAQ5SRI9 462 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 Q6ZSR6 202 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 CLIP4Q8N3C7 705 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 COL26A1Q96A83 441 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 NECTIN4Q96NY8 510 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 PLA2G12AQ9BZM1 189 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 POT1Q9NUX5 634 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 FANCMQ8IYD8 2048 aa14.34□□□□□ -0.11
UBE2D3-207ENST00000394801 LOC105369274A0A096LPK9 316 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 LOC102723532A0A0G2JNH3 316 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 FRS3O43559 492 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 KIAA0513O60268 411 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 GPX5O75715 221 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 CPMP14384 443 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 GABRG2P18507 467 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 OMPP47874 163 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 SIM1P81133 766 aaPredicted RBP14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 PRKCDQ05655 676 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 DECR1Q16698 335 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 PERM1Q5SV97 790 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 TYW3Q6IPR3 259 aaKnown RBP14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 SLC27A4Q6P1M0 643 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 ABI3BPQ7Z7G0 1075 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 OR4N4Q8N0Y3 316 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 TOR1AIP2Q8NFQ8 470 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 ZCCHC10Q8TBK6 192 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 LRR1Q96L50 414 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 ZNF582Q96NG8 517 aaPredicted RBP14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 CFL2Q9Y281 166 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 UGT2A1Q9Y4X1 527 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 LRP4O75096 1905 aa14.33□□□□□ -0.11
UBE2D3-207ENST00000394801 FAM170BA6NMN3 283 aa14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 HBQ1P09105 142 aa14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 CCNYL3P0C7X3 344 aa14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 CKMT1AP12532 417 aa14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 GAS1P54826 345 aa14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 ZNF45Q02386 682 aa14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 SNAPC1Q16533 368 aa14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 PUS10Q3MIT2 529 aaKnown RBP14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 ZNF628Q5EBL2 1059 aa14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 TMEM31Q5JXX7 168 aa14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 FHL5Q5TD97 284 aa14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 SNX29P2Q8IUI4 249 aa14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 TRIM48Q8IWZ4 208 aa14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 OR52I1Q8NGK6 324 aa14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 OR10G6Q8NH81 332 aa14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 BAHD1Q8TBE0 780 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 TMEM163Q8TC26 289 aa14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 ACOT11Q8WXI4 607 aaPredicted RBP14.33□□□□□ -0.12
UBE2D3-207ENST00000394801 CDS1Q92903 461 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms