RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 CDK6Q00534 326 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 MVKQ03426 396 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 EEF1A2Q05639 463 aaKnown RBP6.5□□□□□ -1.37
RTN4-205ENST00000394609 FADDQ13158 208 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 MLC1Q15049 377 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 NEDD8Q15843 81 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 CTF1Q16619 201 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 PRTGQ2VWP7 1150 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 RFX4Q33E94 735 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 CYP27C1Q4G0S4 372 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 RPS26P11Q5JNZ5 115 aaPredicted RBP6.5□□□□□ -1.37
RTN4-205ENST00000394609 OTUD3Q5T2D3 398 aaPredicted RBP6.5□□□□□ -1.37
RTN4-205ENST00000394609 TUBA1AQ71U36 451 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 AKAP14Q86UN6 197 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 C11orf74Q86VG3 221 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 DMRTC2Q8IXT2 367 aaPredicted RBP6.5□□□□□ -1.37
RTN4-205ENST00000394609 C8orf59Q8N0T1 100 aaPredicted RBP6.5□□□□□ -1.37
RTN4-205ENST00000394609 SPARTQ8N0X7 666 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 EID3Q8N140 333 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 ARHGEF39Q8N4T4 335 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 METTL27Q8N6F8 245 aaPredicted RBP6.5□□□□□ -1.37
RTN4-205ENST00000394609 LSM14AQ8ND56 463 aaKnown RBP6.5□□□□□ -1.37
RTN4-205ENST00000394609 OR52E4Q8NGH9 312 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 OR5D16Q8NGK9 328 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 OR6Q1Q8NGQ2 317 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 PSMA8Q8TAA3 256 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 SAP25Q8TEE9 199 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 RNF31Q96EP0 1072 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 C16orf58Q96GQ5 468 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 SSBP4Q9BWG4 385 aaPredicted RBP6.5□□□□□ -1.37
RTN4-205ENST00000394609 SPATA9Q9BWV2 254 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 RBCK1Q9BYM8 510 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 HOXD1Q9GZZ0 328 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 NAA50Q9GZZ1 169 aaKnown RBP6.5□□□□□ -1.37
RTN4-205ENST00000394609 LHPPQ9H008 270 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 SERHL2Q9H4I8 314 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 TMEM38AQ9H6F2 299 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 GAREM1Q9H706 876 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 NTN4Q9HB63 628 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 PDE7BQ9NP56 450 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 EQTNQ9NQ60 294 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 GIMAP4Q9NUV9 329 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 HCN3Q9P1Z3 774 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 SUSD2Q9UGT4 822 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 SAMD4AQ9UPU9 718 aaKnown RBP6.5□□□□□ -1.37
RTN4-205ENST00000394609 MAGED1Q9Y5V3 778 aaPredicted RBP6.5□□□□□ -1.37
RTN4-205ENST00000394609 SLC22A7Q9Y694 548 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 HSPE1-MOB4S4R3N1 261 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 SPTBP11277 2137 aa6.5□□□□□ -1.37
RTN4-205ENST00000394609 HYKKA2RU49 373 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 OR2W5A6NFC9 320 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 hCG_2039718K7EN88 272 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 UPK1AO00322 258 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 HMGN4O00479 90 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 GNGT2O14610 69 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 CHST10O43529 356 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 SIGLEC6O43699 453 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 DUX1O43812 170 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 SCO2O43819 266 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 CDC123O75794 336 aaPredicted RBP6.49□□□□□ -1.37
RTN4-205ENST00000394609 DIRAS1O95057 198 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 ALPLP05186 524 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 HMGN2P05204 90 aaKnown RBP6.49□□□□□ -1.37
RTN4-205ENST00000394609 BCHEP06276 602 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 OR12D1P0DN82 309 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 TNFRSF1BP20333 461 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 ARL4DP49703 201 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 CXCR4P61073 352 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 MAT1AQ00266 395 aaKnown RBP6.49□□□□□ -1.37
RTN4-205ENST00000394609 DAG1Q14118 895 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 LASP1Q14847 261 aaKnown RBP6.49□□□□□ -1.37
RTN4-205ENST00000394609 SYT16Q17RD7 645 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 GUSBP11Q6P575 273 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 TBPL2Q6SJ96 375 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 OLIG3Q7RTU3 272 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 KANSL1Q7Z3B3 1105 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 WDR53Q7Z5U6 358 aaPredicted RBP6.49□□□□□ -1.37
RTN4-205ENST00000394609 PLXDC1Q8IUK5 500 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 CA13Q8N1Q1 262 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 SVOPLQ8N434 492 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 TTC29Q8NA56 475 aaPredicted RBP6.49□□□□□ -1.37
RTN4-205ENST00000394609 SIMC1Q8NDZ2 872 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 OR4K14Q8NGD5 310 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 RHOXF1Q8NHV9 184 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 FBLIM1Q8WUP2 373 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 SLC38A5Q8WUX1 472 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 XAGE5Q8WWM1 108 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 TTC9Q92623 222 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 TMBIM1Q969X1 311 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 CCDC74AQ96AQ1 378 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 TBC1D20Q96BZ9 403 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 ELP4Q96EB1 424 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 NUDT22Q9BRQ3 303 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 FUNDC2Q9BWH2 189 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 ING2Q9H160 280 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 SMOC1Q9H4F8 434 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 LYRM4Q9HD34 91 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 SEMA3GQ9NS98 782 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 MS4A12Q9NXJ0 267 aa6.49□□□□□ -1.37
RTN4-205ENST00000394609 NLGN3Q9NZ94 848 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms