RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 GAS1P54826 345 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 ZNF763Q0D2J5 394 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 C2orf80Q0P641 193 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 RCAN2Q14206 197 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 CEBPEQ15744 281 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 ZYG11AQ6WRX3 759 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 SH2D5Q6ZV89 423 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 CDC20BQ86Y33 519 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 ZPLD1Q8TCW7 415 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 BBS4Q96RK4 519 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 STK38LQ9Y2H1 464 aa15.05■□□□□ -0
PTPRK-208ENST00000392449 NF1P21359 2839 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 PCNX3Q9H6A9 2034 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 FAM221AA4D161 298 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 MYO1GB0I1T2 1018 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 PLOD3O60568 738 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 BCAS2O75934 225 aaPredicted RBP15.04■□□□□ -0
PTPRK-208ENST00000392449 KRT20P35900 424 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 LHX2P50458 406 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 RIPPLY3P57055 190 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 PSG6Q00889 435 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 FAM71E1Q6IPT2 247 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 FRMD7Q6ZUT3 714 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 LUZP2Q86TE4 346 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 RNF138Q8WVD3 245 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 INTS12Q96CB8 462 aaKnown RBP15.04■□□□□ -0
PTPRK-208ENST00000392449 SFXN2Q96NB2 322 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 RTN4RQ9BZR6 473 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 DCDC2Q9UHG0 476 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 ST6GALNAC2Q9UJ37 374 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 DKKL1Q9UK85 242 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 OR10H1Q9Y4A9 318 aa15.04■□□□□ -0
PTPRK-208ENST00000392449 VPS13CQ709C8 3753 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 TUBAL3A6NHL2 446 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 PLOD2O00469 737 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 ZIC3O60481 467 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 DIAPH2O60879 1101 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 GLRA3O75311 464 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 CD1EP15812 388 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 SRD5A2P31213 254 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 MPIP34949 423 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 GCKP35557 465 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 CLDN18P56856 261 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 STX5Q13190 355 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 SF3B4Q15427 424 aaKnown RBP eCLIP15.03■□□□□ -0
PTPRK-208ENST00000392449 IMPG1Q17R60 797 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 CLEC6AQ6EIG7 209 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 ADGRE4PQ86SQ3 457 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 SAMD14Q8IZD0 417 aaPredicted RBP15.03■□□□□ -0
PTPRK-208ENST00000392449 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.03■□□□□ -0
PTPRK-208ENST00000392449 FAM222BQ8WU58 562 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 ERP27Q96DN0 273 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 RMND5BQ96G75 393 aaPredicted RBP15.03■□□□□ -0
PTPRK-208ENST00000392449 EGLN2Q96KS0 407 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 GLIPR2Q9H4G4 154 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 MIEF1Q9NQG6 463 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 SIRT5Q9NXA8 310 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 TAS2R9Q9NYW1 312 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 JKAMPQ9P055 326 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 CLCF1Q9UBD9 225 aa15.03■□□□□ -0
PTPRK-208ENST00000392449 SERTM1A2A2V5 107 aa15.02■□□□□ -0
PTPRK-208ENST00000392449 CCDC151A5D8V7 595 aa15.02■□□□□ -0
PTPRK-208ENST00000392449 UPK1AO00322 258 aa15.02■□□□□ -0
PTPRK-208ENST00000392449 PLIN3O60664 434 aa15.02■□□□□ -0
PTPRK-208ENST00000392449 DPP4P27487 766 aa15.02■□□□□ -0
PTPRK-208ENST00000392449 EVI2BP34910 448 aa15.02■□□□□ -0
PTPRK-208ENST00000392449 OPRM1P35372 400 aa15.02■□□□□ -0
PTPRK-208ENST00000392449 RFX3P48380 749 aa15.02■□□□□ -0
PTPRK-208ENST00000392449 PNLIPRP2P54317 469 aa15.02■□□□□ -0
PTPRK-208ENST00000392449 B3GALT5-AS1P59052 145 aa15.02■□□□□ -0
PTPRK-208ENST00000392449 EFR3AQ14156 821 aa15.02■□□□□ -0
PTPRK-208ENST00000392449 ANKRD26P1Q6NSI1 321 aa15.02■□□□□ -0
PTPRK-208ENST00000392449 ENPP6Q6UWR7 440 aa15.02■□□□□ -0
PTPRK-208ENST00000392449 OR5M1Q8NGP8 315 aa15.02■□□□□ -0
PTPRK-208ENST00000392449 EPS8L3Q8TE67 593 aaKnown RBP15.02■□□□□ -0
PTPRK-208ENST00000392449 GFM2Q969S9 779 aaKnown RBP15.02■□□□□ -0
PTPRK-208ENST00000392449 LRRC46Q96FV0 321 aa15.02■□□□□ -0
PTPRK-208ENST00000392449 DSN1Q9H410 356 aa15.02■□□□□ -0
PTPRK-208ENST00000392449 GALNT8Q9NY28 637 aa15.02■□□□□ -0
PTPRK-208ENST00000392449 H0YC42 278 aa15.01□□□□□ -0.01
PTPRK-208ENST00000392449 KIF2AO00139 706 aaPredicted RBP15.01□□□□□ -0.01
PTPRK-208ENST00000392449 CRCPO75575 148 aa15.01□□□□□ -0.01
PTPRK-208ENST00000392449 TGM6O95932 706 aa15.01□□□□□ -0.01
PTPRK-208ENST00000392449 ZNF708P17019 499 aa15.01□□□□□ -0.01
PTPRK-208ENST00000392449 TPD52P55327 224 aaPredicted RBP15.01□□□□□ -0.01
PTPRK-208ENST00000392449 POU4F3Q15319 338 aa15.01□□□□□ -0.01
PTPRK-208ENST00000392449 NOXRED1Q6NXP6 359 aa15.01□□□□□ -0.01
PTPRK-208ENST00000392449 TRIM46Q7Z4K8 759 aa15.01□□□□□ -0.01
PTPRK-208ENST00000392449 UBQLNLQ8IYU4 475 aa15.01□□□□□ -0.01
PTPRK-208ENST00000392449 OR4K17Q8NGC6 315 aa15.01□□□□□ -0.01
PTPRK-208ENST00000392449 GOT1L1Q8NHS2 421 aaPredicted RBP15.01□□□□□ -0.01
PTPRK-208ENST00000392449 UBLCP1Q8WVY7 318 aaPredicted RBP15.01□□□□□ -0.01
PTPRK-208ENST00000392449 AMDHD1Q96NU7 426 aa15.01□□□□□ -0.01
PTPRK-208ENST00000392449 RBM24Q9BX46 236 aaKnown RBP15.01□□□□□ -0.01
PTPRK-208ENST00000392449 MYNNQ9NPC7 610 aa15.01□□□□□ -0.01
PTPRK-208ENST00000392449 MED11Q9P086 117 aa15.01□□□□□ -0.01
PTPRK-208ENST00000392449 PPP4R1LQ9P1A2 415 aa15.01□□□□□ -0.01
PTPRK-208ENST00000392449 FOXD3Q9UJU5 478 aaPredicted RBP15.01□□□□□ -0.01
PTPRK-208ENST00000392449 C19orf53Q9UNZ5 99 aaPredicted RBP15.01□□□□□ -0.01
PTPRK-208ENST00000392449 FIS1Q9Y3D6 152 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms