RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 OR4D9Q8NGE8 314 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 OR6T1Q8NGN1 323 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 OR52P1PQ8NH57 321 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 FBLIM1Q8WUP2 373 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 PMM1Q92871 262 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 FKBP10Q96AY3 582 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 PITX2Q99697 317 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 DPYSL5Q9BPU6 564 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 FAM192AQ9GZU8 254 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 PAPOLBQ9NRJ5 636 aaKnown RBP10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 FGF21Q9NSA1 209 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 MKLN1Q9UL63 735 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 ATXN7L1Q9ULK2 861 aaPredicted RBP10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 NDRG4Q9ULP0 352 aaKnown RBP10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 CHST2Q9Y4C5 530 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 MMACHCQ9Y4U1 282 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 TRIM64CA6NLI5 447 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 DSCR3O14972 297 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 STX11O75558 287 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 OXSR1O95747 527 aaPredicted RBP10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 RPLP0P05388 317 aaKnown RBP10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 THBS1P07996 1170 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 ATP6V1B1P15313 513 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 FUT4P22083 530 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 RPS4Y1P22090 263 aaKnown RBP10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 ALAS2P22557 587 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 CBLP22681 906 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 ELAVL4P26378 380 aaKnown RBP10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 CCL7P80098 99 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZNF155Q12901 538 aaPredicted RBP10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZNF770Q6IQ21 691 aaPredicted RBP10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 ARHGAP22Q7Z5H3 698 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 PEX5LQ8IYB4 626 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZNF619Q8N2I2 560 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 GPR151Q8TDV0 419 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 NR4A3Q92570 626 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 PRRC1Q96M27 445 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 FUZQ9BT04 418 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 LRRN3Q9H3W5 708 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 CACYBPQ9HB71 228 aaKnown RBP10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 POLE3Q9NRF9 147 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 RLIMQ9NVW2 624 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 DHCR7Q9UBM7 475 aaKnown RBP10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 NDOR1Q9UHB4 597 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 SLC13A4Q9UKG4 626 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZNF232Q9UNY5 417 aa10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZNF443Q9Y2A4 671 aaPredicted RBP10.66□□□□□ -0.7
SMARCAL1-203ENST00000392128 TRBV4-1A0A0J9YWV2 114 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 A0A1W2PRQ8 180 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 AGAP5A6NIR3 686 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 FAAHO00519 579 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 HYAL3O43820 417 aaPredicted RBP10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 UGT2B17O75795 530 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 GUSBP08236 651 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 SYPP08247 313 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 LINGO3P0C6S8 592 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 OR1D4P47884 311 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 EMDP50402 254 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 NR1H2P55055 460 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 POU6F2P78424 691 aaPredicted RBP10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 FUT7Q11130 342 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 RAPSNQ13702 412 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 DGCR6Q14129 220 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 LARS2Q15031 903 aaKnown RBP10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 NPTX1Q15818 432 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 LIN52Q52LA3 116 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 RBM48Q5RL73 367 aaKnown RBP10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 RNF220Q5VTB9 566 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 C7orf57Q8NEG2 295 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 OR9Q2Q8NGE9 314 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 PIK3R3Q92569 461 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 HDAC2Q92769 488 aaKnown RBP10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZNF556Q9HAH1 456 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 FOLH1BQ9HBA9 442 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 NECTIN3Q9NQS3 549 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 KLHL28Q9NXS3 571 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 TMCC3Q9ULS5 477 aa10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 HEMK1Q9Y5R4 338 aaPredicted RBP10.65□□□□□ -0.7
SMARCAL1-203ENST00000392128 A0A087WXM4 84 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 A0A1B0GX78 115 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 KIAA0513O60268 411 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 PRAMEF2O60811 474 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 SP9P0CG40 484 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 CKMT1AP12532 417 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 CYP4B1P13584 511 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 ELK4P28324 431 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 GABRA3P34903 492 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 PSG6Q00889 435 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 ACY1Q03154 408 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 CD47Q08722 323 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 PIN1Q13526 163 aaPredicted RBP10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 ZNHIT3Q15649 155 aaPredicted RBP10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 CLPPQ16740 277 aaPredicted RBP10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 CTU2Q2VPK5 515 aaKnown RBP10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 PROX2Q3B8N5 592 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 DCST1Q5T197 706 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 CCNJQ5T5M9 372 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 PRAMEF17Q5VTA0 474 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 QSOX2Q6ZRP7 698 aa10.65□□□□□ -0.71
SMARCAL1-203ENST00000392128 TSPYL5Q86VY4 417 aaPredicted RBP10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms