RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 FAM219BQ5XKK7 198 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 DMKNQ6E0U4 476 aaPredicted RBP2.47□□□□□ -2.01
PTPRC-205ENST00000391970 REG3GQ6UW15 175 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 ZNF562Q6V9R5 426 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 MISPQ8IVT2 679 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 CCDC36Q8IYA8 594 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 MYOCDQ8IZQ8 938 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 CENPSQ8N2Z9 138 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 FGFRL1Q8N441 504 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 ARL14Q8N4G2 192 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 POM121L12Q8N7R1 296 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 ZBTB44Q8NCP5 570 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 NFAM1Q8NET5 270 aaPredicted RBP2.47□□□□□ -2.01
PTPRC-205ENST00000391970 CCDC26Q8TAB7 109 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 C17orf50Q8WW18 174 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 CRYGNQ8WXF5 182 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 RBM18Q96H35 190 aaKnown RBP2.47□□□□□ -2.01
PTPRC-205ENST00000391970 CFAP53Q96M91 514 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 C16orf45Q96MC5 204 aaPredicted RBP2.47□□□□□ -2.01
PTPRC-205ENST00000391970 RNF41Q9H4P4 317 aaPredicted RBP2.47□□□□□ -2.01
PTPRC-205ENST00000391970 LIN28AQ9H9Z2 209 aaKnown RBP2.47□□□□□ -2.01
PTPRC-205ENST00000391970 AMBNQ9NP70 447 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 ESM1Q9NQ30 184 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 FAM114A2Q9NRY5 505 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 GDAP2Q9NXN4 497 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 BARX2Q9UMQ3 279 aaPredicted RBP2.47□□□□□ -2.01
PTPRC-205ENST00000391970 RNF115Q9Y4L5 304 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 SETD5Q9C0A6 1442 aa2.47□□□□□ -2.01
PTPRC-205ENST00000391970 TDRD15B5MCY1 1934 aaKnown RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 CCDC88BA6NC98 1476 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 BAZ1BQ9UIG0 1483 aaKnown RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 PPIP5K1Q6PFW1 1433 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 IGHV3OR16-12A0A075B7B8 117 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 UQCRHLA0A096LP55 91 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 TTC26A0AVF1 554 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 MFSD2BA6NFX1 497 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 ANKRD30BLA7E2S9 258 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 TMEM110-MUSTN1A8MSY1 372 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 ZNF487B1APH4 448 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 NPIPA2E9PIF3 369 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 H0YL77 283 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 K7EPI3 171 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 CLDN3O15551 220 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 SDC3O75056 442 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 HMMRO75330 724 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 VPS26AO75436 327 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 DIRAS3O95661 229 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 AK1P00568 194 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 UQCRHP07919 91 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 SNRPCP09234 159 aaKnown RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 ANXA4P09525 319 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 WNT2P09544 360 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 HOXB7P09629 217 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 HTR5AP47898 357 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 TRA2BP62995 288 aaKnown RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 MRPS6P82932 125 aaKnown RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 ZNF33BQ06732 778 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 BNIP1Q12981 228 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 RFTN1Q14699 578 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 SEL1L3Q68CR1 1132 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 ZNF772Q68DY9 489 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 TTC19Q6DKK2 380 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 NET1Q7Z628 596 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 TSEN54Q7Z6J9 526 aaKnown RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 GTSCR1Q86UQ5 136 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 TEX9Q8N6V9 391 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 OR52J3Q8NH60 311 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 ITLN1Q8WWA0 313 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 RSPH1Q8WYR4 309 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 TOMM40LQ969M1 308 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 PINX1Q96BK5 328 aaKnown RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 WBP1Q96G27 269 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 FICDQ9BVA6 458 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 TRIM9Q9C026 710 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 IQCGQ9H095 443 aaKnown RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 DPH5Q9H2P9 285 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 RWDD1Q9H446 243 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 KAT8Q9H7Z6 458 aaKnown RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 DCAF13Q9NV06 445 aaKnown RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 KLRF1Q9NZS2 232 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 RCOR3Q9P2K3 495 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 EPS15L1Q9UBC2 864 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 RNF24Q9Y225 148 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 DHRS7Q9Y394 339 aa2.46□□□□□ -2.02
PTPRC-205ENST00000391970 RPAP1Q9BWH6 1393 aaPredicted RBP2.46□□□□□ -2.02
PTPRC-205ENST00000391970 GAPVD1Q14C86 1478 aa2.45□□□□□ -2.02
PTPRC-205ENST00000391970 ATAD2BQ9ULI0 1458 aa2.45□□□□□ -2.02
PTPRC-205ENST00000391970 KIF21AQ7Z4S6 1674 aa2.45□□□□□ -2.02
PTPRC-205ENST00000391970 A0A087WZY1 265 aa2.45□□□□□ -2.02
PTPRC-205ENST00000391970 A0A1B0GUL7 405 aa2.45□□□□□ -2.02
PTPRC-205ENST00000391970 FAM25EA8MYX2 175 aa2.45□□□□□ -2.02
PTPRC-205ENST00000391970 SRRM5B3KS81 715 aa2.45□□□□□ -2.02
PTPRC-205ENST00000391970 LRRTM2O43300 516 aa2.45□□□□□ -2.02
PTPRC-205ENST00000391970 TYROBPO43914 113 aa2.45□□□□□ -2.02
PTPRC-205ENST00000391970 SMPD2O60906 423 aa2.45□□□□□ -2.02
PTPRC-205ENST00000391970 SH3BGRLO75368 114 aa2.45□□□□□ -2.02
PTPRC-205ENST00000391970 CRLF1O75462 422 aa2.45□□□□□ -2.02
PTPRC-205ENST00000391970 VENTXO95231 258 aa2.45□□□□□ -2.02
PTPRC-205ENST00000391970 IFNB1P01574 187 aa2.45□□□□□ -2.02
PTPRC-205ENST00000391970 KRT6BP04259 564 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms