RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 CPSF4O95639 269 aaKnown RBP13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 HMGN2P05204 90 aaKnown RBP13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 ACP2P11117 423 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 GNLYP22749 145 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 RFC3P40938 356 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 MAP3K8P41279 467 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 ATP4BP51164 291 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 DGKQP52824 942 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 PNLIPRP2P54317 469 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 PHC1P78364 1004 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 SNTA1Q13424 505 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 GAB1Q13480 694 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 KRTCAP3Q53RY4 240 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 CDC73Q6P1J9 531 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 GFRALQ6UXV0 394 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 MSANTD1Q6ZTZ1 278 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 SIAH3Q8IW03 269 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 TRIML2Q8N7C3 387 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 OR4N2Q8NGD1 307 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 OR5AK3PQ8NH89 298 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 RFWD2Q8NHY2 731 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 EFHD2Q96C19 240 aaPredicted RBP13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 GPR137Q96N19 417 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 RILPQ96NA2 401 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 CCDC115Q96NT0 180 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 STACQ99469 402 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 OSBPL11Q9BXB4 747 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 ANGPTL4Q9BY76 406 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 ACTRT3Q9BYD9 372 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 TTTY12Q9BZ98 90 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 DUSP22Q9NRW4 184 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 FGFR1OP2Q9NVK5 253 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 GIN1Q9NXP7 522 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 KLRF1Q9NZS2 232 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 NPIPA1Q9UND3 350 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 TRIM33Q9UPN9 1127 aa13.8□□□□□ -0.2
IGHV3-53-201ENST00000390627 A0A0G2JND7 137 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 FAM234BA2RU67 622 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 PRAMEF25A6NGN4 478 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 GLSO94925 669 aaPredicted RBP13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 UQCRC2P22695 453 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 CASP3P42574 277 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 MASP1P48740 699 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 POLR2JP52435 117 aaKnown RBP13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 PPIAP62937 165 aaKnown RBP13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 RBPJQ06330 500 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 FOXO1Q12778 655 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 MRPL49Q13405 166 aaKnown RBP13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 SQLEQ14534 574 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 DUSP5Q16690 384 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 HYAL4Q2M3T9 481 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 RNFT1Q5M7Z0 435 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 SLC30A6Q6NXT4 461 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 PAOXQ6QHF9 649 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 PACS2Q86VP3 889 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 FAM109AQ8N4B1 249 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 COX18Q8N8Q8 333 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 SLC16A11Q8NCK7 471 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 OR9I1Q8NGQ6 314 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 FBXO30Q8TB52 745 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 ADAMTS15Q8TE58 950 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 PIK3R3Q92569 461 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 CHMP6Q96FZ7 201 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 RMND5BQ96G75 393 aaPredicted RBP13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 SLC35G5Q96KT7 338 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 PANX1Q96RD7 426 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 NODALQ96S42 347 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 YIPF4Q9BSR8 244 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 TSPAN10Q9H1Z9 355 aaPredicted RBP13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 PIGUQ9H490 435 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 RMND5AQ9H871 391 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 PROK2Q9HC23 129 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 ZFP64Q9NPA5 681 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 GPATCH2Q9NW75 528 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 TMEM45AQ9NWC5 275 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 TUBA8Q9NY65 449 aaPredicted RBP13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 B4GALT7Q9UBV7 327 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 PCDHGB3Q9Y5G1 929 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 NBASA2RRP1 2371 aa13.79□□□□□ -0.2
IGHV3-53-201ENST00000390627 GXYLT2A0PJZ3 443 aa13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 FAM166BA8MTA8 275 aa13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 TRIM3O75382 744 aaPredicted RBP13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 UNC5CO95185 931 aa13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 IL33O95760 270 aa13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 ELAVL4P26378 380 aaKnown RBP13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 UQCRFS1P47985 274 aa13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 RFX3P48380 749 aa13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 KCNC4Q03721 635 aa13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 EXOSC6Q5RKV6 272 aaKnown RBP13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 BICRALQ6AI39 1079 aa13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 DESI1Q6ICB0 168 aa13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 C6orf120Q7Z4R8 191 aa13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 GHDCQ8N2G8 530 aa13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 GOT1L1Q8NHS2 421 aaPredicted RBP13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 C16orf58Q96GQ5 468 aa13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 TMEM41AQ96HV5 264 aa13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 JSRP1Q96MG2 331 aaPredicted RBP13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 RABEP2Q9H5N1 569 aa13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 ABCG2Q9UNQ0 655 aa13.78□□□□□ -0.2
IGHV3-53-201ENST00000390627 SVILO95425 2214 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms