RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 SCN2BO60939 215 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 RBBP9O75884 186 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 TAS2R43P59537 309 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 TAP2Q03519 686 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 SEC23BQ15437 767 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 GRK1Q15835 563 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 PLK5Q496M5 336 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 FCRLBQ6BAA4 426 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 CYB561A3Q8NBI2 242 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 ALG8Q9BVK2 526 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 GABARAPL1Q9H0R8 117 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 BRF2Q9HAW0 419 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 IDSP22304 550 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 CFL1P23528 166 aaKnown RBP13.48□□□□□ -0.25
RTF1-201ENST00000389629 WASP42768 502 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 CTSOP43234 321 aaPredicted RBP13.48□□□□□ -0.25
RTF1-201ENST00000389629 KIR2DL3P43628 341 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 CLCNKAP51800 687 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 MGAT3Q09327 533 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 ZNF155Q12901 538 aaPredicted RBP13.48□□□□□ -0.25
RTF1-201ENST00000389629 NXPE4Q6UWF7 544 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 CCDC190Q86UF4 302 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 TMEM145Q8NBT3 493 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 UBTD2Q8WUN7 234 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 ZNF514Q96K75 400 aaPredicted RBP13.48□□□□□ -0.25
RTF1-201ENST00000389629 EGLN3Q9H6Z9 239 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 ASB4Q9Y574 426 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 INSL5Q9Y5Q6 135 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 FEZF1A0PJY2 475 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 GTPBP1O00178 669 aaKnown RBP13.48□□□□□ -0.25
RTF1-201ENST00000389629 RLN2P04090 185 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 ARHGDIBP52566 201 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 KIAA1024LP59773 190 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 RAB40BQ12829 278 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 KANSL1Q7Z3B3 1105 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 GID4Q8IVV7 300 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 SORCS1Q8WY21 1168 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 SLC6A16Q9GZN6 736 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 PCBD2Q9H0N5 130 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 SIRT5Q9NXA8 310 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 TMEM5Q9Y2B1 443 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 PCDHGA2Q9Y5H1 932 aa13.48□□□□□ -0.25
RTF1-201ENST00000389629 TRBV2A0A0J9YWF9 115 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.47□□□□□ -0.25
RTF1-201ENST00000389629 SRCP12931 536 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 CCR6P51684 374 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 SP3Q02447 781 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 OPCMLQ14982 345 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 SAMD8Q96LT4 415 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 ZNF285Q96NJ3 590 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 NARFLQ9H6Q4 476 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 WDR45Q9Y484 360 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 M0R036 132 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 NDUFV2P19404 249 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 GRPRP30550 384 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 SRP9P49458 86 aaKnown RBP13.47□□□□□ -0.25
RTF1-201ENST00000389629 GALK2Q01415 458 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 GAB1Q13480 694 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 IDO2Q6ZQW0 420 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 PGBD3Q8N328 593 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 PXYLP1Q8TE99 480 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 ST8SIA2Q92186 375 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 SLC25A46Q96AG3 418 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 SLC7A5P2Q9GIP4 190 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 OR2S2Q9NQN1 319 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 EVA1BQ9NVM1 165 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 ASIC5Q9NY37 505 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 A0A0G2JMP0 313 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 POLR2CP19387 275 aaPredicted RBP13.47□□□□□ -0.25
RTF1-201ENST00000389629 DDX6P26196 483 aaKnown RBP eCLIP13.47□□□□□ -0.253e-7■■■□□ 15.1
RTF1-201ENST00000389629 FGL2Q14314 439 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 GGTA1PQ4G0N0 100 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 L3MBTL4Q8NA19 623 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 OR4M2Q8NGB6 313 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 CPNE2Q96FN4 548 aaPredicted RBP13.47□□□□□ -0.25
RTF1-201ENST00000389629 OR2M2Q96R28 347 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 SRRQ9GZT4 340 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 KNL1Q8NG31 2342 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 NDUFS4O43181 175 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 TYRP14679 529 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 IL1RNP18510 177 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 PSMA3P25788 255 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 BMPR1AP36894 532 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 KCNJ10P78508 379 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 E2F1Q01094 437 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 FAM76BQ5HYJ3 339 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 TAS1R1Q7RTX1 841 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 TRAM1L1Q8N609 369 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 ZNF680Q8NEM1 530 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 MRPS30Q9NP92 439 aaKnown RBP13.47□□□□□ -0.25
RTF1-201ENST00000389629 ZNF226Q9NYT6 803 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 GABRQQ9UN88 632 aa13.47□□□□□ -0.25
RTF1-201ENST00000389629 LEFTY2O00292 366 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 GOSR2O14653 212 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 DSCR3O14972 297 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 ADAM12O43184 909 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 ACP5P13686 325 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 AHRP35869 848 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 SLC25A24Q6NUK1 477 aa13.46□□□□□ -0.25
RTF1-201ENST00000389629 ZNF852Q6ZMS4 543 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms