RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 MMP27Q9H306 513 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 ZNF768Q9H5H4 540 aaKnown RBP7.24□□□□□ -1.25
CDKL5-202ENST00000379996 RNF167Q9H6Y7 350 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 SIRT3Q9NTG7 399 aaPredicted RBP7.24□□□□□ -1.25
CDKL5-202ENST00000379996 SCN3BQ9NY72 215 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 SPHK1Q9NYA1 384 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 WARS2Q9UGM6 360 aaKnown RBP7.24□□□□□ -1.25
CDKL5-202ENST00000379996 ISPDA4D126 451 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 OR6C74A6NCV1 312 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 SDC3O75056 442 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 SPNP16150 400 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 TPP2P29144 1249 aaPredicted RBP7.24□□□□□ -1.25
CDKL5-202ENST00000379996 SELENBP1Q13228 472 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 FLYWCH1Q4VC44 716 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 C12orf73Q69YU5 71 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 HIST2H2AA3Q6FI13 130 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 IKBIPQ70UQ0 350 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 CCDC190Q86UF4 302 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 PLXDC1Q8IUK5 500 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 MMP21Q8N119 569 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 ARHGEF39Q8N4T4 335 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 TBC1D19Q8N5T2 526 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 OR4E2Q8NGC2 313 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 OR10G2Q8NGC3 310 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 OR4A15Q8NGL6 344 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 TCTN2Q96GX1 697 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 TXNDC15Q96J42 360 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 WFDC6Q9BQY6 131 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 COPS4Q9BT78 406 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 AICDAQ9GZX7 198 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 SERHL2Q9H4I8 314 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 A4GALTQ9NPC4 353 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 RASSF1Q9NS23 344 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 GPR83Q9NYM4 423 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 CNOT2Q9NZN8 540 aaKnown RBP7.24□□□□□ -1.25
CDKL5-202ENST00000379996 ADAM29Q9UKF5 820 aa7.24□□□□□ -1.25
CDKL5-202ENST00000379996 FITM1A5D6W6 292 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 MYO1GB0I1T2 1018 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 PCDH17O14917 1159 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 CPSF4O95639 269 aaKnown RBP7.23□□□□□ -1.25
CDKL5-202ENST00000379996 C6orf47O95873 294 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 EPPINO95925 133 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 ACSM2AQ08AH3 577 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 SCARB2Q14108 478 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 ZNF181Q2M3W8 571 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 TMEM35AQ53FP2 167 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 STEAP3Q658P3 488 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 ACSM2BQ68CK6 577 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 TMEM71Q6P5X7 295 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 MED25Q71SY5 747 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 NAXDQ8IW45 347 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 OR9Q2Q8NGE9 314 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 ZNF675Q8TD23 568 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 CREB3L4Q8TEY5 395 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 WDR89Q96FK6 387 aaPredicted RBP7.23□□□□□ -1.25
CDKL5-202ENST00000379996 SLC41A2Q96JW4 573 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 PIP5K1AQ99755 562 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 SLC35A5Q9BS91 424 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 DCSTAMPQ9H295 470 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 CPNE5Q9HCH3 593 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 PARD6AQ9NPB6 346 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 ADPRHL2Q9NX46 363 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 DAPK2Q9UIK4 370 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 WBP11Q9Y2W2 641 aaKnown RBP7.23□□□□□ -1.25
CDKL5-202ENST00000379996 NUP210LQ5VU65 1888 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 H3BMH7 237 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 TNFRSF11BO00300 401 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 COQ9O75208 318 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 ANXA8P13928 327 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 RGS6P49758 472 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 TPD52P55327 224 aaPredicted RBP7.23□□□□□ -1.25
CDKL5-202ENST00000379996 IFI44LQ53G44 452 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 SOWAHCQ53LP3 525 aaPredicted RBP7.23□□□□□ -1.25
CDKL5-202ENST00000379996 SFTPA2Q8IWL1 248 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 OR4D11Q8NGI4 311 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 NFKBIDQ8NI38 313 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 TP53INP1Q96A56 240 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 OPALINQ96PE5 141 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 CENPOQ9BU64 300 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 XKR8Q9H6D3 395 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 CXorf36Q9H7Y0 433 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 HRASLS2Q9NWW9 162 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 ACSL6Q9UKU0 697 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 TESMINQ9Y4I5 508 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 ARHGEF17Q96PE2 2063 aaPredicted RBP7.23□□□□□ -1.25
CDKL5-202ENST00000379996 PSMB9P28065 219 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 ARHGDIAP52565 204 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 SNRPGP62308 76 aaKnown RBP7.23□□□□□ -1.25
CDKL5-202ENST00000379996 LSM3P62310 102 aaKnown RBP7.23□□□□□ -1.25
CDKL5-202ENST00000379996 DNASE1L3Q13609 305 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 SLBPQ14493 270 aaKnown RBP eCLIP7.23□□□□□ -1.25
CDKL5-202ENST00000379996 SEC23BQ15437 767 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 ZNF404Q494X3 552 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 GCNT6Q5T4J0 391 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 CDCP2Q5VXM1 449 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 TMIGD1Q6UXZ0 262 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 USP43Q70EL4 1123 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 ZNF367Q7RTV3 350 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 D2HGDHQ8N465 521 aa7.23□□□□□ -1.25
CDKL5-202ENST00000379996 C19orf47Q8N9M1 422 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms