RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 ULK2Q8IYT8 1036 aa17.29■□□□□ 0.36
TMEM88B-201ENST00000378821 SAMD14Q8IZD0 417 aaPredicted RBP17.29■□□□□ 0.36
TMEM88B-201ENST00000378821 HGDQ93099 445 aa17.29■□□□□ 0.36
TMEM88B-201ENST00000378821 LCORQ96JN0 433 aaPredicted RBP17.29■□□□□ 0.36
TMEM88B-201ENST00000378821 PPP1R36Q96LQ0 422 aa17.29■□□□□ 0.36
TMEM88B-201ENST00000378821 C1orf50Q9BV19 199 aa17.29■□□□□ 0.36
TMEM88B-201ENST00000378821 EXO5Q9H790 373 aa17.29■□□□□ 0.36
TMEM88B-201ENST00000378821 PNPOQ9NVS9 261 aa17.29■□□□□ 0.36
TMEM88B-201ENST00000378821 KCNN3Q9UGI6 736 aa17.29■□□□□ 0.36
TMEM88B-201ENST00000378821 BAIAP2L1Q9UHR4 511 aa17.29■□□□□ 0.36
TMEM88B-201ENST00000378821 C15orf41Q9Y2V0 281 aa17.29■□□□□ 0.36
TMEM88B-201ENST00000378821 POLQO75417 2590 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 MYO1GB0I1T2 1018 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 AKAP10O43572 662 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 SNNO75324 88 aaPredicted RBP17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 POU3F2P20265 443 aaPredicted RBP17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 GDF1P27539 372 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 PPICP45877 212 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 DCAF7P61962 342 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 SNTA1Q13424 505 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 SLC25A35Q3KQZ1 300 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 TRMT12Q53H54 448 aaKnown RBP17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 C6orf136Q5SQH8 315 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 VASNQ6EMK4 673 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 ANKRD26P1Q6NSI1 321 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 FAM9CQ8IZT9 166 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 OR10Q1Q8NGQ4 319 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 KAT2AQ92830 837 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 TUBGCP3Q96CW5 907 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 JSRP1Q96MG2 331 aaPredicted RBP17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 GNRHR2Q96P88 292 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 BBS4Q96RK4 519 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 TIMP4Q99727 224 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 PRDM14Q9GZV8 571 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 SLC24A3Q9HC58 644 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 TAS2R7Q9NYW3 318 aa17.28■□□□□ 0.36
TMEM88B-201ENST00000378821 EPPINO95925 133 aa17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 CEACAM8P31997 349 aaPredicted RBP17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 PTGDSP41222 190 aa17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 TESK1Q15569 626 aa17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 ZNF385BQ569K4 471 aa17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 TIGD3Q6B0B8 471 aa17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 SLC30A6Q6NXT4 461 aa17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 LIX1Q8N485 282 aa17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 GOLGA6L1Q8N7Z2 621 aa17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 FNDC5Q8NAU1 212 aa17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 OR52R1Q8NGF1 315 aa17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 RAB3IL1Q8TBN0 382 aa17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 ITPAQ9BY32 194 aa17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 REEP4Q9H6H4 257 aa17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 ANKRA2Q9H9E1 313 aa17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 THAP1Q9NVV9 213 aa17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 PRODH2Q9UF12 536 aa17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 BCAP29Q9UHQ4 241 aa17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 GPR55Q9Y2T6 319 aaPredicted RBP17.27■□□□□ 0.36
TMEM88B-201ENST00000378821 CELSR1Q9NYQ6 3014 aa17.27■□□□□ 0.35
TMEM88B-201ENST00000378821 HMGB1P1B2RPK0 211 aaPredicted RBP17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 BCAS2O75934 225 aaPredicted RBP17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 MAPK1P28482 360 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 PTPN6P29350 595 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 NTSP30990 170 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 TIMP3P35625 211 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 ASMTP46597 345 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 TRPC1P48995 793 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 NCBP2P52298 156 aaKnown RBP eCLIP17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 DLX5P56178 289 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 PDE7AQ13946 482 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 IL23RQ5VWK5 629 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 ATG16L1Q676U5 607 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 TRIM42Q8IWZ5 723 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 PRR22Q8IZ63 422 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 KIRREL3Q8IZU9 778 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 OMA1Q96E52 524 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 ZNF764Q96H86 408 aaPredicted RBP17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 BTBD9Q96Q07 612 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 NUF2Q9BZD4 464 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 GLIPR2Q9H4G4 154 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 MANSC1Q9H8J5 431 aa17.26■□□□□ 0.35
TMEM88B-201ENST00000378821 FRG2CA6NGY1 282 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 HSPB2A8KAH6 182 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 TBX19O60806 448 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 MPIP34949 423 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 OCRLQ01968 901 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 PTGR1Q14914 329 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 HSPB2Q16082 182 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 NNATQ16517 81 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 ACSF3Q4G176 576 aaPredicted RBP17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 DESI1Q6ICB0 168 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 POMZP3Q6PJE2 187 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 PM20D2Q8IYS1 436 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 OR7G2Q8NG99 324 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 RNF138Q8WVD3 245 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 CIDECQ96AQ7 238 aaPredicted RBP17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 PPCDCQ96CD2 204 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 AMDHD1Q96NU7 426 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 NODALQ96S42 347 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 AKTIPQ9H8T0 292 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 ALKBH4Q9NXW9 302 aa17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 MARCOQ9UEW3 520 aaPredicted RBP17.25■□□□□ 0.35
TMEM88B-201ENST00000378821 AKAP9Q99996 3911 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms