RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 P2RY11Q96G91 374 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 CABLES2Q9BTV7 478 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 HEG1Q9ULI3 1381 aa8.34□□□□□ -1.08
LIG3-202ENST00000378526 TMEM200CA6NKL6 621 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 SLC43A1O75387 559 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 CH25HO95992 272 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 POU6F2P78424 691 aaPredicted RBP8.33□□□□□ -1.08
LIG3-202ENST00000378526 TMEM62Q0P6H9 643 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 CD276Q5ZPR3 534 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.33□□□□□ -1.08
LIG3-202ENST00000378526 C3orf67Q6ZVT6 689 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 TPRA1Q86W33 373 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 ZNF417Q8TAU3 575 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 ZFPM2Q8WW38 1151 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 GCDHQ92947 438 aaPredicted RBP8.33□□□□□ -1.08
LIG3-202ENST00000378526 MMP20O60882 483 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 JTBO76095 146 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 ALDH2P05091 517 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 CBSLP0DN79 551 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 CD1EP15812 388 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 CBSP35520 551 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 WNT3AP56704 352 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 CXCR4P61073 352 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 RPL24P83731 157 aaKnown RBP8.33□□□□□ -1.08
LIG3-202ENST00000378526 MALLQ13021 153 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 FLYWCH1Q4VC44 716 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 OR2T2Q6IF00 324 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 NIPA2Q8N8Q9 360 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 LHX5Q9H2C1 402 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 BCAS3Q9H6U6 928 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 BPIFA1Q9NP55 256 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 FAM155BO75949 473 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 HTR3AP46098 478 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 CRKLP46109 303 aaKnown RBP8.33□□□□□ -1.08
LIG3-202ENST00000378526 SIM1P81133 766 aaPredicted RBP8.33□□□□□ -1.08
LIG3-202ENST00000378526 TANKQ92844 425 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 AK3Q9UIJ7 227 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 OR2M5A3KFT3 312 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 SUSD5O60279 629 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 JRKO75564 520 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 SOX14O95416 240 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 FOXN2P32314 431 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 PKIAP61925 76 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 TBCEQ15813 527 aaPredicted RBP8.33□□□□□ -1.08
LIG3-202ENST00000378526 ITPRIPL2Q3MIP1 535 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 ZC3H12AQ5D1E8 599 aaKnown RBP8.33□□□□□ -1.08
LIG3-202ENST00000378526 ENPP6Q6UWR7 440 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 SERPINA9Q86WD7 417 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 GSX1Q9H4S2 264 aaPredicted RBP8.33□□□□□ -1.08
LIG3-202ENST00000378526 SPATA31A6Q5VVP1 1343 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 MEIS3P2A8K0S8 358 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 OR1F1O43749 312 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 SCO1O75880 301 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 OR4F21O95013 312 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 PDGFBP01127 241 aaPredicted RBP8.33□□□□□ -1.08
LIG3-202ENST00000378526 C1QBP02746 253 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 LAMTOR4Q0VGL1 99 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 ZNF836Q6ZNA1 936 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 KLBQ86Z14 1044 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 PKMYT1Q99640 499 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 GPR21Q99679 349 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 EBF4Q9BQW3 602 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 MCOLN1Q9GZU1 580 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 AGO3Q9H9G7 860 aaKnown RBP8.33□□□□□ -1.08
LIG3-202ENST00000378526 SPACA1Q9HBV2 294 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 MRPL15Q9P015 296 aaKnown RBP8.33□□□□□ -1.08
LIG3-202ENST00000378526 OSGIN2Q9Y236 505 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 BMP2P12643 396 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 HNRNPA2B1P22626 353 aaKnown RBP8.33□□□□□ -1.08
LIG3-202ENST00000378526 PTBP1P26599 531 aaKnown RBP eCLIP8.33□□□□□ -1.08
LIG3-202ENST00000378526 DNAJB13P59910 316 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 PLP2Q04941 152 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 KLF1Q13351 362 aaPredicted RBP8.33□□□□□ -1.08
LIG3-202ENST00000378526 HES1Q14469 280 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 CYP1B1Q16678 543 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 SFRP5Q5T4F7 317 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 C17orf107Q6ZR85 190 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 OR1S2Q8NGQ3 325 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 UBQLN4Q9NRR5 601 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 SARDHQ9UL12 918 aa8.33□□□□□ -1.08
LIG3-202ENST00000378526 GRXCR2A6NFK2 248 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 GRIK5Q16478 980 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 ODF4Q2M2E3 257 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 KIAA0319Q5VV43 1072 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 LCLAT1Q6UWP7 414 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 ETV3LQ6ZN32 361 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 ZNF611Q8N823 705 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 OR5AK2Q8NH90 309 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 SPRYD4Q8WW59 207 aaPredicted RBP8.32□□□□□ -1.08
LIG3-202ENST00000378526 TAF9BQ9HBM6 251 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 KLK14Q9P0G3 267 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 PPP1R3CQ9UQK1 317 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 TRAV19A0A0A6YYK7 116 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 FAM24AA6NFZ4 105 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 PRDX5P30044 214 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 ERFEQ4G0M1 354 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 TCTE1Q5JU00 501 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 WDR73Q6P4I2 378 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 OGFOD3Q6PK18 319 aa8.32□□□□□ -1.08
LIG3-202ENST00000378526 HACD2Q6Y1H2 254 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms