RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 IGLV3-10A0A075B6K4 115 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 ZNF208O43345 1280 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 RNF13O43567 381 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 SCO2O43819 266 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 PRKYO43930 277 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 PPM1BO75688 479 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 PRLHRP49683 370 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 PROX2Q3B8N5 592 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 GPR149Q86SP6 731 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 METTL25Q8N6Q8 603 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 ADAMTS18Q8TE60 1221 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 ZNF583Q96ND8 569 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 GNG8Q9UK08 70 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 SARDHQ9UL12 918 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 ZFR2Q9UPR6 939 aaKnown RBP14.23□□□□□ -0.13
NPHP4-201ENST00000378156 ENPP4Q9Y6X5 453 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 M0R129 80 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 CRHBPP24387 322 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 CPZQ66K79 652 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 KIF18BQ86Y91 864 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 GID4Q8IVV7 300 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 LRR1Q96L50 414 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 HYLS1Q96M11 299 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 ABCD2Q9UBJ2 740 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 RARRES3Q9UL19 164 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 CDK5RAP2Q96SN8 1893 aa14.23□□□□□ -0.13
NPHP4-201ENST00000378156 A0A1B0GVT2 93 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 MTHFD2P13995 350 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 GCGRP47871 477 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 SELENOWP63302 87 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 RPS26P11Q5JNZ5 115 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-201ENST00000378156 PSD4Q8NDX1 1056 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 GAB3Q8WWW8 586 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 TTTY10Q9BZA0 68 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 NUP205Q92621 2012 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 C2orf92A0A1B0GVN3 265 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 GABRR3A8MPY1 467 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 ALPLP05186 524 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 C1SP09871 688 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 PET100P0DJ07 73 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 UGT2B10P36537 528 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 PXNP49023 591 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-201ENST00000378156 UGT8Q16880 541 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 GTF2IRD2BQ6EKJ0 949 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 LRRN1Q6UXK5 716 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 RFLNAQ6ZTI6 216 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 TMED4Q7Z7H5 227 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 SERPINA11Q86U17 422 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 GTF2IRD2Q86UP8 949 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 KIAA1143Q96AT1 154 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-201ENST00000378156 METTL2AQ96IZ6 378 aaKnown RBP14.22□□□□□ -0.13
NPHP4-201ENST00000378156 HS6ST2Q96MM7 605 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 CSN2P05814 226 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 VEZF1Q14119 521 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 KIR2DS3Q14952 304 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 MAD2L1BPQ15013 274 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-201ENST00000378156 NHSL2Q5HYW2 709 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.22□□□□□ -0.13
NPHP4-201ENST00000378156 PAPD5Q8NDF8 572 aaKnown RBP14.22□□□□□ -0.13
NPHP4-201ENST00000378156 S100PBPQ96BU1 408 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 TSNAXQ99598 290 aaKnown RBP14.22□□□□□ -0.13
NPHP4-201ENST00000378156 ERVK13-1Q9NX77 482 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 TRAV6A0A075B6T7 132 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 C12orf71A8MTZ7 269 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 MMP2P08253 660 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 GPR143P51810 404 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 IRF4Q15306 451 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 NSDHLQ15738 373 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 C22orf42Q6IC83 251 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 RPL13AP3Q6NVV1 102 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 RASGEF1AQ8N9B8 481 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 PNPLA2Q96AD5 504 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 MTHFD2LQ9H903 347 aaPredicted RBP14.22□□□□□ -0.13
NPHP4-201ENST00000378156 ATPIF1Q9UII2 106 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 BTNL2Q9UIR0 455 aa14.22□□□□□ -0.13
NPHP4-201ENST00000378156 ARPC4-TTLL3A0A0A6YYG9 625 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 FUOMA2VDF0 154 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 OXSR1O95747 527 aaPredicted RBP14.21□□□□□ -0.13
NPHP4-201ENST00000378156 AK4P27144 223 aaPredicted RBP14.21□□□□□ -0.13
NPHP4-201ENST00000378156 CD40LGP29965 261 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 EIF1AXP47813 144 aaKnown RBP14.21□□□□□ -0.13
NPHP4-201ENST00000378156 TANGO2Q6ICL3 276 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 SBSNQ6UWP8 590 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 SPATC1Q76KD6 591 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 Q8N402 240 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 FAM86B1Q8N7N1 296 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 OR52E1Q8NGJ3 308 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 TOE1Q96GM8 510 aaKnown RBP14.21□□□□□ -0.13
NPHP4-201ENST00000378156 TNFRSF12AQ9NP84 129 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 ACTR10Q9NZ32 417 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 OR6C2Q9NZP2 312 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 LAMP5Q9UJQ1 280 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 HTR1AP08908 422 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 EMX1Q04741 257 aaPredicted RBP14.21□□□□□ -0.13
NPHP4-201ENST00000378156 TMEM225Q6GV28 225 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 ANKRD33Q7Z3H0 272 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 P4HA3Q7Z4N8 544 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 SPRED1Q7Z699 444 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 FAM217AQ8IXS0 508 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 NUDT8Q8WV74 236 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms