RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 NUP43Q8NFH3 380 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 OR2L5Q8NG80 312 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 DMRTB1Q96MA1 342 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 CES1P1Q9UKY3 287 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 XIRP2A4UGR9 3374 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 HMX3A6NHT5 357 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 GPR89AB7ZAQ6 455 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 GPR89BP0CG08 455 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 SSTR4P31391 388 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 SLC1A3P43003 542 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 OMPP47874 163 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 CDH11P55287 796 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 CAV3P56539 151 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 ZNF628Q5EBL2 1059 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 AGBL4Q5VU57 503 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 OR9A2Q8NGT5 310 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 PIGXQ8TBF5 258 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 ARMC5Q96C12 935 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 RAB11FIP5Q9BXF6 653 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 NUMA1Q14980 2115 aa23.72■■□□□ 1.39
C9orf40-201ENST00000376854 DENND4AQ7Z401 1863 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 SEC14L5O43304 696 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 CH25HO95992 272 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 CCNYL3P0C7X3 344 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 F3P13726 295 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 GNSP15586 552 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 FGF9P31371 208 aaPredicted RBP23.71■■□□□ 1.39
C9orf40-201ENST00000376854 MPIP34949 423 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 TRHRP34981 398 aaPredicted RBP23.71■■□□□ 1.39
C9orf40-201ENST00000376854 SOX18P35713 384 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 AVPR1BP47901 424 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 RAB8AP61006 207 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 HOXC5Q00444 222 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 SLC35F1Q5T1Q4 408 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 OR52E1Q8NGJ3 308 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 FGF13Q92913 245 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 KIAA1143Q96AT1 154 aaPredicted RBP23.71■■□□□ 1.39
C9orf40-201ENST00000376854 FAM172BPA6NC97 362 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 OR52A4PA6NMU1 304 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 CENPXA8MT69 81 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 IFNA8P32881 189 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 WASP42768 502 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 MRPS15P82914 257 aaKnown RBP23.71■■□□□ 1.39
C9orf40-201ENST00000376854 SLC30A6Q6NXT4 461 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 CD200R1LQ6Q8B3 271 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 FBXL6Q8N531 539 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 ZNF485Q8NCK3 441 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 SMARCD2Q92925 531 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 GIMAP4Q9NUV9 329 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 THAP10Q9P2Z0 257 aaPredicted RBP23.71■■□□□ 1.39
C9orf40-201ENST00000376854 COMMD3Q9UBI1 195 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 CLCA2Q9UQC9 943 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 CHST2Q9Y4C5 530 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 PLEKHM1Q9Y4G2 1056 aa23.71■■□□□ 1.39
C9orf40-201ENST00000376854 GRXCR1A8MXD5 290 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 C5orf67F2Z3F1 127 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 CASKO14936 926 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 PAK4O96013 591 aaPredicted RBP23.7■■□□□ 1.38
C9orf40-201ENST00000376854 TRAPPC2P0DI81 140 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 TRAPPC2BP0DI82 140 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 PPP2R2DQ66LE6 453 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 RDH10Q8IZV5 341 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 VWA5B2Q8N398 1253 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 POGLUT1Q8NBL1 392 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 RFKQ969G6 155 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 ELP4Q96EB1 424 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 AHRP35869 848 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 TRIM23P36406 574 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 C16orf62Q7Z3J2 963 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 ATP6V1C2Q8NEY4 427 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 OR2L3Q8NG85 312 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 OR4F15Q8NGB8 312 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 OR4Q3Q8NH05 313 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 POLMQ9NP87 494 aaPredicted RBP23.7■■□□□ 1.38
C9orf40-201ENST00000376854 CALML5Q9NZT1 146 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 LIPT1Q9Y234 373 aa23.7■■□□□ 1.38
C9orf40-201ENST00000376854 TRDV1A0A1B0GX56 115 aa23.69■■□□□ 1.38
C9orf40-201ENST00000376854 B4DXG7 233 aa23.69■■□□□ 1.38
C9orf40-201ENST00000376854 LALBAP00709 142 aa23.69■■□□□ 1.38
C9orf40-201ENST00000376854 PPP3R1P63098 170 aa23.69■■□□□ 1.38
C9orf40-201ENST00000376854 NKAIN4Q8IVV8 208 aa23.69■■□□□ 1.38
C9orf40-201ENST00000376854 TMEM145Q8NBT3 493 aa23.69■■□□□ 1.38
C9orf40-201ENST00000376854 OSTF1Q92882 214 aa23.69■■□□□ 1.38
C9orf40-201ENST00000376854 ANKRD19PQ9H560 264 aa23.69■■□□□ 1.38
C9orf40-201ENST00000376854 PHPT1Q9NRX4 125 aaPredicted RBP23.69■■□□□ 1.38
C9orf40-201ENST00000376854 PRKAG2Q9UGJ0 569 aa23.69■■□□□ 1.38
C9orf40-201ENST00000376854 NTNG1Q9Y2I2 539 aa23.69■■□□□ 1.38
C9orf40-201ENST00000376854 DOCK9Q9BZ29 2069 aa23.69■■□□□ 1.38
C9orf40-201ENST00000376854 TRPM6Q9BX84 2022 aa23.69■■□□□ 1.38
C9orf40-201ENST00000376854 SURF4O15260 269 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 CSF2P04141 144 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 PDGFRLQ15198 375 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 GET4Q7L5D6 327 aaPredicted RBP23.68■■□□□ 1.38
C9orf40-201ENST00000376854 UBE2J2Q8N2K1 259 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 KAT2AQ92830 837 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 KLHL28Q9NXS3 571 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 SERGEFQ9UGK8 458 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 PLA2G10O15496 165 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 PROM1O43490 865 aa23.68■■□□□ 1.38
C9orf40-201ENST00000376854 FPR3P25089 353 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms