RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 NRP1O14786 923 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 SLC16A5O15375 505 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 CA12O43570 354 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 PRAMEF11O60813 436 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 C7P10643 843 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 NKX3-2P78367 333 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 PON2Q15165 354 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 XKR5Q6UX68 686 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 ABHD12BQ7Z5M8 362 aaPredicted RBP11.88□□□□□ -0.51
VPS13A-204ENST00000376634 KIAA0907Q7Z7F0 614 aaPredicted RBP11.88□□□□□ -0.51
VPS13A-204ENST00000376634 SPIN2AQ99865 258 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 SPIN2BQ9BPZ2 258 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 SLC2A5P22732 501 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 EEF1E1-BLOC1S5C9J1V9 151 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 STK17BO94768 372 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 TMEM225BP0DP42 221 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 CKMT1AP12532 417 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 CSNK2A1P68400 391 aaPredicted RBP11.88□□□□□ -0.51
VPS13A-204ENST00000376634 OGDHQ02218 1023 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 SF3B4Q15427 424 aaKnown RBP eCLIP11.88□□□□□ -0.511e-6■■■□□ 17.8
VPS13A-204ENST00000376634 CSNK2A3Q8NEV1 391 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 OR10T2Q8NGX3 314 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 OR5AK2Q8NH90 309 aa11.88□□□□□ -0.51
VPS13A-204ENST00000376634 APOBEC3GQ9HC16 384 aaKnown RBP11.88□□□□□ -0.51
VPS13A-204ENST00000376634 AHSGP02765 367 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 PRKACGP22612 351 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 RPL35P42766 123 aaKnown RBP11.87□□□□□ -0.51
VPS13A-204ENST00000376634 PRAMEF8Q5VWM4 474 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 PRAMEF7Q5VXH5 474 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 ZNF541Q9H0D2 1346 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 KLHL33A6NCF5 533 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 WNT7AO00755 349 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 PMM2O15305 246 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 FAM189A1O60320 539 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 FMO6PO60774 539 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 GPR37L1O60883 481 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 CDK1P06493 297 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 ZNF28P17035 718 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 FXYD4P59646 89 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 WDR53Q7Z5U6 358 aaPredicted RBP11.87□□□□□ -0.51
VPS13A-204ENST00000376634 PLXDC1Q8IUK5 500 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 DBF4BQ8NFT6 615 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 FBXL18Q96ME1 805 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 WDR92Q96MX6 357 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 BTBD2Q9BX70 525 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 ARMC1Q9NVT9 282 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 ARVCFO00192 962 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 PRKACAP17612 351 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 RAB3BP20337 219 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 CRYZQ08257 329 aaKnown RBP11.87□□□□□ -0.51
VPS13A-204ENST00000376634 BBS1Q8NFJ9 593 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 OR52E2Q8NGJ4 325 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 FGF18O76093 207 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 PPP1R3AQ16821 1122 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 IRF2BP1Q8IU81 584 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 OR51Q1Q8NH59 317 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 TAAR8Q969N4 342 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 PLEKHJ1Q9NW61 149 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 A0A0D9SEW6 157 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 PABPC4LP0CB38 370 aaKnown RBP11.87□□□□□ -0.51
VPS13A-204ENST00000376634 TSFMP43897 325 aaKnown RBP11.87□□□□□ -0.51
VPS13A-204ENST00000376634 RNASE10Q5GAN6 216 aaKnown RBP11.87□□□□□ -0.51
VPS13A-204ENST00000376634 C6orf141Q5SZD1 244 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 SMYD5Q6GMV2 418 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 ZNF767PQ75MW2 155 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 OR2T4Q8NH00 348 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 OR5P2Q8WZ92 322 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 SYT7O43581 403 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 TPPPO94811 219 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 CHRNB4P30926 498 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 EVI2BP34910 448 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 ZNF678Q5SXM1 525 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 LEG1Q6P5S2 330 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 SGPP2Q8IWX5 399 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 SLC2A12Q8TD20 617 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 DIO2Q92813 273 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 TFP02787 698 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 SERPINA7P05543 415 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 ACBD7Q8N6N7 88 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 LEFTY2O00292 366 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 MC2RQ01718 297 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 MOGSQ13724 837 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 PCGF3Q3KNV8 242 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 CNOT9Q92600 299 aaKnown RBP11.87□□□□□ -0.51
VPS13A-204ENST00000376634 BIRC8Q96P09 236 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 TWNKQ96RR1 684 aa11.87□□□□□ -0.51
VPS13A-204ENST00000376634 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 FEZF1A0PJY2 475 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 GGT5P36269 586 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 AFF3P51826 1226 aaKnown RBP11.86□□□□□ -0.51
VPS13A-204ENST00000376634 HSD17B7P56937 341 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 TMEM53Q6P2H8 277 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 KCNIP4Q6PIL6 250 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 RDH10Q8IZV5 341 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 SCML4Q8N228 414 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 ABCG5Q9H222 651 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 PLSCR5A0PG75 271 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 SCGB1D1O95968 90 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 EPOP01588 193 aa11.86□□□□□ -0.51
VPS13A-204ENST00000376634 CCL5P13501 91 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms