RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 MYZAPP0CAP1 466 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 BGNP21810 368 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 MAPK1P28482 360 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 IL12BP29460 328 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 GPC1P35052 558 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 KRT20P35900 424 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 FRKP42685 505 aaPredicted RBP13.02□□□□□ -0.33
CLCN6-203ENST00000376490 SLC1A6P48664 564 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 CDK9P50750 372 aaKnown RBP13.02□□□□□ -0.33
CLCN6-203ENST00000376490 PRKAG1P54619 331 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 SNTA1Q13424 505 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 PTGR1Q14914 329 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 EIPR1Q53HC9 387 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 WIPI1Q5MNZ9 446 aaPredicted RBP13.02□□□□□ -0.33
CLCN6-203ENST00000376490 ANKRD42Q8N9B4 389 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 WDSUB1Q8N9V3 476 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 FNDC5Q8NAU1 212 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 OR7A2PQ8NGA2 310 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 RND1Q92730 232 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 TUBGCP3Q96CW5 907 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 MTERF3Q96E29 417 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 PPP1R36Q96LQ0 422 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 DOCK7Q96N67 2140 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 COQ3Q9NZJ6 369 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 ATP6V1HQ9UI12 483 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 MAPRE3Q9UPY8 281 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 RNF6Q9Y252 685 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 SLC6A5Q9Y345 797 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 RAP2CQ9Y3L5 183 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 FAM215AQ9Y5M1 114 aa13.02□□□□□ -0.33
CLCN6-203ENST00000376490 INTS1Q8N201 2190 aaKnown RBP13.02□□□□□ -0.33
CLCN6-203ENST00000376490 UNC79Q9P2D8 2635 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 ITPR2Q14571 2701 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 C15orf38-AP3S2A0A0A6YYH1 394 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 C19orf84I3L1E1 186 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 SNPHO15079 494 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 ABCB7O75027 752 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 ERLIN1O75477 346 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 LAMP1P11279 417 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 PRPS2P11908 318 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 CYP4B1P13584 511 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 ELAVL4P26378 380 aaKnown RBP13.01□□□□□ -0.33
CLCN6-203ENST00000376490 RPL14P50914 215 aaKnown RBP13.01□□□□□ -0.33
CLCN6-203ENST00000376490 STX3Q13277 289 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 EFR3AQ14156 821 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 PDCD2Q16342 344 aaPredicted RBP13.01□□□□□ -0.33
CLCN6-203ENST00000376490 CYP27C1Q4G0S4 372 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 OR5M10Q6IEU7 315 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 R3HCC1LQ7Z5L2 792 aaKnown RBP13.01□□□□□ -0.33
CLCN6-203ENST00000376490 YRDCQ86U90 279 aaKnown RBP13.01□□□□□ -0.33
CLCN6-203ENST00000376490 CCDC71Q8IV32 467 aaPredicted RBP13.01□□□□□ -0.33
CLCN6-203ENST00000376490 NUP43Q8NFH3 380 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 OR10Q1Q8NGQ4 319 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 ZFP28Q8NHY6 868 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 CA5BP1Q8WTZ4 195 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 ZBED6CLQ96FA7 236 aaPredicted RBP13.01□□□□□ -0.33
CLCN6-203ENST00000376490 SORT1Q99523 831 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 TIMP4Q99727 224 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 TTYH2Q9BSA4 534 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 LMF2Q9BU23 707 aaKnown RBP13.01□□□□□ -0.33
CLCN6-203ENST00000376490 EQTNQ9NQ60 294 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 SERHLQ9NQF3 203 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 ACSS1Q9NUB1 689 aaPredicted RBP13.01□□□□□ -0.33
CLCN6-203ENST00000376490 CBLCQ9ULV8 474 aa13.01□□□□□ -0.33
CLCN6-203ENST00000376490 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.01□□□□□ -0.33
CLCN6-203ENST00000376490 MED12LQ86YW9 2145 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 GXYLT2A0PJZ3 443 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 FIGNL2A6NMB9 653 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 C17orf51A8MQB3 221 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 SCAMP2O15127 329 aaKnown RBP13□□□□□ -0.33
CLCN6-203ENST00000376490 WDR1O75083 606 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 CBR3O75828 277 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 SNRPB2P08579 225 aaKnown RBP13□□□□□ -0.33
CLCN6-203ENST00000376490 IFI6P09912 130 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 GLI4P10075 376 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 GRK2P25098 689 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 GABRA3P34903 492 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 KIR3DL1P43629 444 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 GAS1P54826 345 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 WDR4P57081 412 aaKnown RBP13□□□□□ -0.33
CLCN6-203ENST00000376490 PSPHP78330 225 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 CRYZQ08257 329 aaKnown RBP13□□□□□ -0.33
CLCN6-203ENST00000376490 ZNHIT3Q15649 155 aaPredicted RBP13□□□□□ -0.33
CLCN6-203ENST00000376490 HHATQ5VTY9 493 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 VASNQ6EMK4 673 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 B3GNT6Q6ZMB0 384 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 ACAD11Q709F0 780 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 KRTCAP2Q8N6L1 136 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 FAM83FQ8NEG4 500 aaPredicted RBP13□□□□□ -0.33
CLCN6-203ENST00000376490 PIK3R3Q92569 461 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 MARVELD3Q96A59 401 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 UCK2Q9BZX2 261 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 AKTIPQ9H8T0 292 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 Q9N2J8 555 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 CHST11Q9NPF2 352 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 PNPOQ9NVS9 261 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 FLRT3Q9NZU0 649 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 MAST4O15021 2626 aa13□□□□□ -0.33
CLCN6-203ENST00000376490 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.99□□□□□ -0.33
CLCN6-203ENST00000376490 A0A1W2PRB8 838 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms